A Matrix package for R


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Documentation for package `Matrix' version 0.995-11

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A B C D E F G H I K L M N P Q R S T U V W Z misc

!,ldenseMatrix-method Virtual Class "ldenseMatrix" of Dense Logical Matrices
!,ldiMatrix-method Class "ldiMatrix" of Diagonal Logical Matrices
!,lsparseMatrix-method Sparse logical matrices
!,ltpMatrix-method Triangular Dense Logical Matrices
!,ltrMatrix-method Triangular Dense Logical Matrices
%*%,CsparseMatrix,CsparseMatrix-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
%*%,CsparseMatrix,denseMatrix-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
%*%,ddenseMatrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
%*%,ddiMatrix,ddiMatrix-method Class "ddiMatrix" of Diagonal Numeric Matrices
%*%,dgCMatrix,dgeMatrix-method Compressed, sparse, column-oriented numeric matrices
%*%,dgCMatrix,matrix-method Compressed, sparse, column-oriented numeric matrices
%*%,dgeMatrix,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
%*%,dgeMatrix,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
%*%,dgeMatrix,diagonalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
%*%,dgeMatrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
%*%,dgeMatrix,dsyMatrix-method Symmetric Dense Numeric Matrices
%*%,dgeMatrix,dtpMatrix-method Packed triangular dense matrices
%*%,dgeMatrix,dtrMatrix-method Triangular, dense, numeric matrices
%*%,dgeMatrix,matrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
%*%,dgeMatrix,numeric-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
%*%,diagonalMatrix,dgeMatrix-method Class "diagonalMatrix" of Diagonal Matrices
%*%,diagonalMatrix,matrix-method Class "diagonalMatrix" of Diagonal Matrices
%*%,diagonalMatrix,sparseMatrix-method Class "diagonalMatrix" of Diagonal Matrices
%*%,dMatrix,integer-method (Virtual) Class "dMatrix" of "double" Matrices
%*%,dsparseMatrix,ddenseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
%*%,dsparseMatrix,dgeMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
%*%,dspMatrix,dgeMatrix-method Symmetric Dense Numeric Matrices
%*%,dspMatrix,integer-method Symmetric Dense Numeric Matrices
%*%,dspMatrix,matrix-method Symmetric Dense Numeric Matrices
%*%,dspMatrix,numeric-method Symmetric Dense Numeric Matrices
%*%,dsyMatrix,dgeMatrix-method Symmetric Dense Numeric Matrices
%*%,dtpMatrix,dgeMatrix-method Packed triangular dense matrices
%*%,dtpMatrix,dtpMatrix-method Packed triangular dense matrices
%*%,dtpMatrix,matrix-method Packed triangular dense matrices
%*%,dtpMatrix,numeric-method Packed triangular dense matrices
%*%,dtrMatrix,dgeMatrix-method Triangular, dense, numeric matrices
%*%,dtrMatrix,dtrMatrix-method Triangular, dense, numeric matrices
%*%,dtrMatrix,matrix-method Triangular, dense, numeric matrices
%*%,integer,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
%*%,ldenseMatrix,lsparseMatrix-method Sparse logical matrices
%*%,lgCMatrix,lgCMatrix-method Sparse logical matrices
%*%,lsparseMatrix,ldenseMatrix-method Sparse logical matrices
%*%,lsparseMatrix,lsparseMatrix-method Sparse logical matrices
%*%,matrix,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
%*%,matrix,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
%*%,matrix,diagonalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
%*%,matrix,dtpMatrix-method Packed triangular dense matrices
%*%,matrix,dtrMatrix-method Triangular, dense, numeric matrices
%*%,Matrix,Matrix-method Virtual Class "Matrix" Class of Matrices
%*%,Matrix,numeric-method Virtual Class "Matrix" Class of Matrices
%*%,Matrix,pMatrix-method Permutation matrices
%*%,matrix,pMatrix-method Permutation matrices
%*%,numeric,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
%*%,numeric,dtpMatrix-method Packed triangular dense matrices
%*%,numeric,Matrix-method Virtual Class "Matrix" Class of Matrices
%*%,pMatrix,Matrix-method Permutation matrices
%*%,pMatrix,matrix-method Permutation matrices
%*%,pMatrix,pMatrix-method Permutation matrices
%*%,sparseMatrix,diagonalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
+,dgTMatrix,dgTMatrix-method Sparse matrices in triplet form
+,Matrix,missing-method Virtual Class "Matrix" Class of Matrices
-,lsparseMatrix,missing-method Sparse logical matrices
-,Matrix,missing-method Virtual Class "Matrix" Class of Matrices
-,pMatrix,missing-method Permutation matrices
-,sparseMatrix,missing-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices

-- A --

anova,mer-method Mixed Model Representations and *mer Methods
Arith,dgCMatrix,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
Arith,dgCMatrix,numeric-method Compressed, sparse, column-oriented numeric matrices
Arith,dgeMatrix,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
Arith,dgeMatrix,numeric-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
Arith,dMatrix,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
Arith,dMatrix,numeric-method (Virtual) Class "dMatrix" of "double" Matrices
Arith,dsparseMatrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
Arith,dsparseMatrix,numeric-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
Arith,numeric,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
Arith,numeric,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
Arith,numeric,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
Arith,numeric,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
as.array,Matrix-method Virtual Class "Matrix" Class of Matrices
as.matrix,Matrix-method Virtual Class "Matrix" Class of Matrices
as.vector,dgeMatrix,missing-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
as.vector,ldenseMatrix,missing-method Virtual Class "ldenseMatrix" of Dense Logical Matrices
as.vector,lgeMatrix,missing-method Class "lgeMatrix" of General Dense Logical Matrices
as.vector,Matrix,missing-method Virtual Class "Matrix" Class of Matrices

-- B --

band Extract bands of a matrix
band,CsparseMatrix-method Extract bands of a matrix
band-methods Extract bands of a matrix
BIC Bayesian Information Criterion
BIC,ANY-method Bayesian Information Criterion
BIC,logLik-method Bayesian Information Criterion
BunchKaufman-class Cholesky and Bunch-Kaufman Decompositions

-- C --

CAex Albers' example Matrix with "Difficult" Eigen Factorization
cbind2,ddenseMatrix,ddenseMatrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
cbind2,ddenseMatrix,matrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
cbind2,ddenseMatrix,numeric-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
cbind2,dsparseMatrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
cbind2,dsparseMatrix,matrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
cbind2,dsparseMatrix,numeric-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
cbind2,matrix,ddenseMatrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
cbind2,matrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
cbind2,Matrix,Matrix-method Virtual Class "Matrix" Class of Matrices
cbind2,Matrix,missing-method Virtual Class "Matrix" Class of Matrices
cbind2,Matrix,NULL-method Virtual Class "Matrix" Class of Matrices
cbind2,NULL,Matrix-method Virtual Class "Matrix" Class of Matrices
cbind2,numeric,ddenseMatrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
cbind2,numeric,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
chol,dgeMatrix,ANY-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
chol,dpoMatrix,ANY-method Positive Semi-definite Dense Numeric Matrices
chol,dpoMatrix-method Positive Semi-definite Dense Numeric Matrices
chol,dppMatrix,ANY-method Positive Semi-definite Dense Numeric Matrices
chol,dppMatrix-method Positive Semi-definite Dense Numeric Matrices
chol,dsCMatrix,logical-method Numeric Symmetric Sparse (column compressed) Matrices
chol,dsCMatrix,missing-method Numeric Symmetric Sparse (column compressed) Matrices
chol,lmer,ANY-method Mixed Model Representations and *mer Methods
chol,lsCMatrix,logical-method Sparse logical matrices
chol,lsCMatrix,missing-method Sparse logical matrices
chol,pedigree-method Class "pedigree"
Cholesky-class Cholesky and Bunch-Kaufman Decompositions
coef,mer-method Mixed Model Representations and *mer Methods
coef.lmer-class Mixed Model Representations and *mer Methods
coerce,CsparseMatrix,denseMatrix-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
coerce,CsparseMatrix,TsparseMatrix-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
coerce,ddenseMatrix,matrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
coerce,ddiMatrix,dgCMatrix-method Class "ddiMatrix" of Diagonal Numeric Matrices
coerce,ddiMatrix,dgeMatrix-method Class "ddiMatrix" of Diagonal Numeric Matrices
coerce,ddiMatrix,dgTMatrix-method Class "ddiMatrix" of Diagonal Numeric Matrices
coerce,denseMatrix,CsparseMatrix-method Virtual Class "denseMatrix" of All Dense Matrices
coerce,denseMatrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
coerce,denseMatrix,TsparseMatrix-method Virtual Class "denseMatrix" of All Dense Matrices
coerce,dgCMatrix,dgBCMatrix-method Compressed, sparse, column-oriented numeric matrices
coerce,dgCMatrix,dgeMatrix-method Compressed, sparse, column-oriented numeric matrices
coerce,dgCMatrix,dgTMatrix-method Compressed, sparse, column-oriented numeric matrices
coerce,dgCMatrix,dsCMatrix-method Compressed, sparse, column-oriented numeric matrices
coerce,dgCMatrix,dtCMatrix-method Compressed, sparse, column-oriented numeric matrices
coerce,dgCMatrix,lgCMatrix-method Compressed, sparse, column-oriented numeric matrices
coerce,dgCMatrix,matrix-method Compressed, sparse, column-oriented numeric matrices
coerce,dgeMatrix,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
coerce,dgeMatrix,dgTMatrix-method Sparse matrices in triplet form
coerce,dgeMatrix,dpoMatrix-method Positive Semi-definite Dense Numeric Matrices
coerce,dgeMatrix,dppMatrix-method Positive Semi-definite Dense Numeric Matrices
coerce,dgeMatrix,dsCMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dgeMatrix,dspMatrix-method Symmetric Dense Numeric Matrices
coerce,dgeMatrix,dsTMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dgeMatrix,dsyMatrix-method Symmetric Dense Numeric Matrices
coerce,dgeMatrix,dtrMatrix-method Triangular, dense, numeric matrices
coerce,dgeMatrix,lgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
coerce,dgeMatrix,matrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
coerce,dgRMatrix,dgeMatrix-method Compressed, sparse, row-oriented numeric matrices
coerce,dgRMatrix,dgTMatrix-method Compressed, sparse, row-oriented numeric matrices
coerce,dgRMatrix,matrix-method Compressed, sparse, row-oriented numeric matrices
coerce,dgTMatrix,dgCMatrix-method Sparse matrices in triplet form
coerce,dgTMatrix,dgeMatrix-method Sparse matrices in triplet form
coerce,dgTMatrix,dsCMatrix-method Sparse matrices in triplet form
coerce,dgTMatrix,dsTMatrix-method Sparse matrices in triplet form
coerce,dgTMatrix,dtTMatrix-method Sparse matrices in triplet form
coerce,dgTMatrix,graphNEL-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
coerce,dgTMatrix,matrix-method Sparse matrices in triplet form
coerce,diagonalMatrix,generalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
coerce,diagonalMatrix,matrix-method Class "diagonalMatrix" of Diagonal Matrices
coerce,diagonalMatrix,sparseMatrix-method Class "diagonalMatrix" of Diagonal Matrices
coerce,diagonalMatrix,triangularMatrix-method Class "diagonalMatrix" of Diagonal Matrices
coerce,dMatrix,dgeMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
coerce,dMatrix,matrix-method (Virtual) Class "dMatrix" of "double" Matrices
coerce,dMatrix,sparseMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
coerce,dpoMatrix,correlation-method Positive Semi-definite Dense Numeric Matrices
coerce,dpoMatrix,dppMatrix-method Positive Semi-definite Dense Numeric Matrices
coerce,dppMatrix,dpoMatrix-method Positive Semi-definite Dense Numeric Matrices
coerce,dsCMatrix,dgCMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsCMatrix,dgeMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsCMatrix,dgTMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsCMatrix,dsTMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsCMatrix,dsyMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsCMatrix,lsCMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsCMatrix,matrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dspMatrix,dgeMatrix-method Symmetric Dense Numeric Matrices
coerce,dspMatrix,dsyMatrix-method Symmetric Dense Numeric Matrices
coerce,dspMatrix,lspMatrix-method Symmetric Dense Numeric Matrices
coerce,dspMatrix,matrix-method Symmetric Dense Numeric Matrices
coerce,dsTMatrix,dgeMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsTMatrix,dgTMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsTMatrix,dsCMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsTMatrix,dsyMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsTMatrix,lsTMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsTMatrix,matrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsyMatrix,dgeMatrix-method Symmetric Dense Numeric Matrices
coerce,dsyMatrix,dsCMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsyMatrix,dspMatrix-method Symmetric Dense Numeric Matrices
coerce,dsyMatrix,dsTMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,dsyMatrix,lsyMatrix-method Symmetric Dense Numeric Matrices
coerce,dsyMatrix,matrix-method Symmetric Dense Numeric Matrices
coerce,dtCMatrix,dgCMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtCMatrix,dgeMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtCMatrix,dgTMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtCMatrix,dtrMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtCMatrix,dtTMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtCMatrix,ltCMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtCMatrix,TsparseMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtpMatrix,dgeMatrix-method Packed triangular dense matrices
coerce,dtpMatrix,dtrMatrix-method Packed triangular dense matrices
coerce,dtpMatrix,dtTMatrix-method Packed triangular dense matrices
coerce,dtpMatrix,ltpMatrix-method Packed triangular dense matrices
coerce,dtpMatrix,matrix-method Packed triangular dense matrices
coerce,dtrMatrix,dgeMatrix-method Triangular, dense, numeric matrices
coerce,dtrMatrix,dtpMatrix-method Triangular, dense, numeric matrices
coerce,dtrMatrix,ltrMatrix-method Triangular, dense, numeric matrices
coerce,dtrMatrix,matrix-method Triangular, dense, numeric matrices
coerce,dtTMatrix,dgeMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtTMatrix,dgTMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtTMatrix,dtCMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtTMatrix,dtrMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtTMatrix,ltTMatrix-method Triangular, (compressed) sparse column matrices
coerce,dtTMatrix,matrix-method Triangular, (compressed) sparse column matrices
coerce,graph,sparseMatrix-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
coerce,graphAM,sparseMatrix-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
coerce,graphNEL,dsCMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,graphNEL,sparseMatrix-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
coerce,integer,pMatrix-method Permutation matrices
coerce,ldenseMatrix,matrix-method Virtual Class "ldenseMatrix" of Dense Logical Matrices
coerce,ldiMatrix,lgCMatrix-method Class "ldiMatrix" of Diagonal Logical Matrices
coerce,ldiMatrix,lgTMatrix-method Class "ldiMatrix" of Diagonal Logical Matrices
coerce,lgCMatrix,dgCMatrix-method Sparse logical matrices
coerce,lgCMatrix,lgeMatrix-method Sparse logical matrices
coerce,lgCMatrix,lgTMatrix-method Sparse logical matrices
coerce,lgCMatrix,matrix-method Sparse logical matrices
coerce,lgeMatrix,dgeMatrix-method Class "lgeMatrix" of General Dense Logical Matrices
coerce,lgeMatrix,lgCMatrix-method Class "lgeMatrix" of General Dense Logical Matrices
coerce,lgeMatrix,lgTMatrix-method Class "lgeMatrix" of General Dense Logical Matrices
coerce,lgeMatrix,lspMatrix-method Class "lgeMatrix" of General Dense Logical Matrices
coerce,lgeMatrix,lsyMatrix-method Class "lgeMatrix" of General Dense Logical Matrices
coerce,lgeMatrix,ltpMatrix-method Class "lgeMatrix" of General Dense Logical Matrices
coerce,lgeMatrix,ltrMatrix-method Class "lgeMatrix" of General Dense Logical Matrices
coerce,lgeMatrix,matrix-method Class "lgeMatrix" of General Dense Logical Matrices
coerce,lgTMatrix,dgTMatrix-method Sparse logical matrices
coerce,lgTMatrix,lgCMatrix-method Sparse logical matrices
coerce,lgTMatrix,matrix-method Sparse logical matrices
coerce,lmer,dsTMatrix-method Mixed Model Representations and *mer Methods
coerce,lsCMatrix,dgTMatrix-method Sparse logical matrices
coerce,lsCMatrix,dsCMatrix-method Sparse logical matrices
coerce,lsCMatrix,lgCMatrix-method Sparse logical matrices
coerce,lsCMatrix,lsTMatrix-method Sparse logical matrices
coerce,lsCMatrix,matrix-method Sparse logical matrices
coerce,lspMatrix,dspMatrix-method Symmetric Dense Logical Matrices
coerce,lspMatrix,lgeMatrix-method Symmetric Dense Logical Matrices
coerce,lspMatrix,lsyMatrix-method Symmetric Dense Logical Matrices
coerce,lsyMatrix,dsyMatrix-method Symmetric Dense Logical Matrices
coerce,lsyMatrix,lgeMatrix-method Symmetric Dense Logical Matrices
coerce,lsyMatrix,lspMatrix-method Symmetric Dense Logical Matrices
coerce,ltCMatrix,dMatrix-method Sparse logical matrices
coerce,ltCMatrix,dtCMatrix-method Sparse logical matrices
coerce,ltCMatrix,lgCMatrix-method Sparse logical matrices
coerce,ltCMatrix,matrix-method Sparse logical matrices
coerce,ltpMatrix,dtpMatrix-method Triangular Dense Logical Matrices
coerce,ltpMatrix,lgeMatrix-method Triangular Dense Logical Matrices
coerce,ltpMatrix,ltrMatrix-method Triangular Dense Logical Matrices
coerce,ltrMatrix,dtrMatrix-method Triangular Dense Logical Matrices
coerce,ltrMatrix,lgeMatrix-method Triangular Dense Logical Matrices
coerce,ltrMatrix,ltpMatrix-method Triangular Dense Logical Matrices
coerce,ltTMatrix,dtTMatrix-method Sparse logical matrices
coerce,ltTMatrix,lgTMatrix-method Sparse logical matrices
coerce,ltTMatrix,matrix-method Sparse logical matrices
coerce,matrix,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
coerce,matrix,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
coerce,matrix,dgRMatrix-method Compressed, sparse, row-oriented numeric matrices
coerce,matrix,dgTMatrix-method Sparse matrices in triplet form
coerce,Matrix,diagonalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
coerce,matrix,diagonalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
coerce,matrix,dpoMatrix-method Positive Semi-definite Dense Numeric Matrices
coerce,matrix,dppMatrix-method Positive Semi-definite Dense Numeric Matrices
coerce,matrix,dsCMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,matrix,dspMatrix-method Symmetric Dense Numeric Matrices
coerce,matrix,dsTMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
coerce,matrix,dsyMatrix-method Symmetric Dense Numeric Matrices
coerce,matrix,dtCMatrix-method Triangular, (compressed) sparse column matrices
coerce,matrix,dtpMatrix-method Packed triangular dense matrices
coerce,matrix,dtrMatrix-method Triangular, dense, numeric matrices
coerce,matrix,dtTMatrix-method Triangular, (compressed) sparse column matrices
coerce,matrix,ldenseMatrix-method Virtual Class "ldenseMatrix" of Dense Logical Matrices
coerce,matrix,lgCMatrix-method Sparse logical matrices
coerce,matrix,lgeMatrix-method Class "lgeMatrix" of General Dense Logical Matrices
coerce,matrix,lgTMatrix-method Sparse logical matrices
coerce,matrix,lspMatrix-method Symmetric Dense Logical Matrices
coerce,matrix,lsyMatrix-method Symmetric Dense Logical Matrices
coerce,matrix,ltCMatrix-method Sparse logical matrices
coerce,matrix,ltpMatrix-method Triangular Dense Logical Matrices
coerce,matrix,ltrMatrix-method Triangular Dense Logical Matrices
coerce,mer,dtCMatrix-method Mixed Model Representations and *mer Methods
coerce,mer,pMatrix-method Mixed Model Representations and *mer Methods
coerce,pdIdent,corrmatrix-method Class "corrmatrix"
coerce,pdMat,corrmatrix-method Class "corrmatrix"
coerce,pdmatrix,corrmatrix-method Class "corrmatrix"
coerce,pdNatural,corrmatrix-method Class "corrmatrix"
coerce,pedigree,data.frame-method Class "pedigree"
coerce,pedigree,dtCMatrix-method Class "pedigree"
coerce,pMatrix,lgTMatrix-method Permutation matrices
coerce,pMatrix,matrix-method Permutation matrices
coerce,sparseMatrix,graph-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
coerce,sparseMatrix,graphNEL-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
coerce,TsparseMatrix,CsparseMatrix-method Class "TsparseMatrix" of Sparse Matrices in Triplet Form
coerce,TsparseMatrix,graphNEL-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
coerce<-,pdNatural,corrmatrix-method Class "corrmatrix"
colMeans,CsparseMatrix-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
colMeans,denseMatrix-method Virtual Class "denseMatrix" of All Dense Matrices
colMeans,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
colMeans,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
colMeans,dgTMatrix-method Sparse matrices in triplet form
colMeans,sparseMatrix-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
colMeans,TsparseMatrix-method Class "TsparseMatrix" of Sparse Matrices in Triplet Form
colSums,CsparseMatrix-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
colSums,denseMatrix-method Virtual Class "denseMatrix" of All Dense Matrices
colSums,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
colSums,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
colSums,dgTMatrix-method Sparse matrices in triplet form
colSums,sparseMatrix-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
colSums,TsparseMatrix-method Class "TsparseMatrix" of Sparse Matrices in Triplet Form
Compare,ANY,Matrix-method Virtual Class "Matrix" Class of Matrices
Compare,dMatrix,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
Compare,dMatrix,numeric-method (Virtual) Class "dMatrix" of "double" Matrices
Compare,Matrix,ANY-method Virtual Class "Matrix" Class of Matrices
Compare,Matrix,Matrix-method Virtual Class "Matrix" Class of Matrices
Compare,numeric,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
compMatrix-class Class "compMatrix" of Composite (Factorizable) Matrices
confint,mer-method Mixed Model Representations and *mer Methods
correlation-class Positive Semi-definite Dense Numeric Matrices
corrmatrix-class Class "corrmatrix"
crossprod,ANY,Matrix-method Virtual Class "Matrix" Class of Matrices
crossprod,CsparseMatrix,missing-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
crossprod,ddenseMatrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
crossprod,ddenseMatrix,missing-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
crossprod,ddiMatrix,ddiMatrix-method Class "ddiMatrix" of Diagonal Numeric Matrices
crossprod,dgCMatrix,dgeMatrix-method Compressed, sparse, column-oriented numeric matrices
crossprod,dgCMatrix,matrix-method Compressed, sparse, column-oriented numeric matrices
crossprod,dgCMatrix,missing-method Compressed, sparse, column-oriented numeric matrices
crossprod,dgeMatrix,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
crossprod,dgeMatrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
crossprod,dgeMatrix,matrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
crossprod,dgeMatrix,missing-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
crossprod,dgeMatrix,numeric-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
crossprod,dgTMatrix,matrix-method Sparse matrices in triplet form
crossprod,dgTMatrix,missing-method Sparse matrices in triplet form
crossprod,dgTMatrix,numeric-method Sparse matrices in triplet form
crossprod,diagonalMatrix,dgeMatrix-method Class "diagonalMatrix" of Diagonal Matrices
crossprod,diagonalMatrix,matrix-method Class "diagonalMatrix" of Diagonal Matrices
crossprod,diagonalMatrix,sparseMatrix-method Class "diagonalMatrix" of Diagonal Matrices
crossprod,dMatrix,integer-method (Virtual) Class "dMatrix" of "double" Matrices
crossprod,dsparseMatrix,ddenseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
crossprod,dsparseMatrix,dgeMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
crossprod,dtrMatrix,missing-method Triangular, dense, numeric matrices
crossprod,integer,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
crossprod,ldenseMatrix,lsparseMatrix-method Sparse logical matrices
crossprod,lgCMatrix,missing-method Sparse logical matrices
crossprod,lgTMatrix,missing-method Sparse logical matrices
crossprod,lsparseMatrix,ldenseMatrix-method Sparse logical matrices
crossprod,lsparseMatrix,lsparseMatrix-method Sparse logical matrices
crossprod,lsparseMatrix,missing-method Sparse logical matrices
crossprod,lsparseMatrix-method Sparse logical matrices
crossprod,Matrix,ANY-method Virtual Class "Matrix" Class of Matrices
crossprod,matrix,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
crossprod,Matrix,numeric-method Virtual Class "Matrix" Class of Matrices
crossprod,numeric,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
crossprod,numeric,Matrix-method Virtual Class "Matrix" Class of Matrices
crossprod,sparseMatrix,diagonalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
crossprod,TsparseMatrix,missing-method Class "TsparseMatrix" of Sparse Matrices in Triplet Form
CsparseMatrix-class Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form

-- D --

dCHMsimpl-class CHOLMOD-based Cholesky factorizations
dCHMsuper-class CHOLMOD-based Cholesky factorizations
dCholCMatrix-class Cholesky Decompositions of dsCMatrix Objects
ddenseMatrix-class Virtual Class "ddenseMatrix" of Numeric Dense Matrices
ddiMatrix-class Class "ddiMatrix" of Diagonal Numeric Matrices
denseMatrix-class Virtual Class "denseMatrix" of All Dense Matrices
determinant,ddenseMatrix,logical-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
determinant,ddenseMatrix,missing-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
determinant,dgeMatrix,logical-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
determinant,dgeMatrix,missing-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
determinant,dpoMatrix,logical-method Positive Semi-definite Dense Numeric Matrices
determinant,dppMatrix,logical-method Positive Semi-definite Dense Numeric Matrices
determinant,dsCMatrix,logical-method Numeric Symmetric Sparse (column compressed) Matrices
determinant,dsCMatrix,missing-method Numeric Symmetric Sparse (column compressed) Matrices
determinant,dtpMatrix,logical-method Packed triangular dense matrices
determinant,dtpMatrix,missing-method Packed triangular dense matrices
determinant,dtrMatrix,logical-method Triangular, dense, numeric matrices
determinant,dtrMatrix,missing-method Triangular, dense, numeric matrices
deviance,mer-method Mixed Model Representations and *mer Methods
deviance,summary.mer-method Mixed Model Representations and *mer Methods
dgCMatrix-class Compressed, sparse, column-oriented numeric matrices
dgeMatrix-class Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
dgRMatrix-class Compressed, sparse, row-oriented numeric matrices
dgTMatrix-class Sparse matrices in triplet form
diag,ddenseMatrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
diag,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
diag,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
diag,dgRMatrix-method Compressed, sparse, row-oriented numeric matrices
diag,diagonalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
diag,dtpMatrix-method Packed triangular dense matrices
Diagonal Create Diagonal Matrix Object
diagonalMatrix-class Class "diagonalMatrix" of Diagonal Matrices
dim,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
dim,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
dim,dgRMatrix-method Compressed, sparse, row-oriented numeric matrices
dim,Matrix-method Virtual Class "Matrix" Class of Matrices
dimnames,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
dimnames,Matrix-method Virtual Class "Matrix" Class of Matrices
dimnames<-,dgeMatrix,list-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
dimnames<-,Matrix,list-method Virtual Class "Matrix" Class of Matrices
dMatrix-class (Virtual) Class "dMatrix" of "double" Matrices
dpoMatrix-class Positive Semi-definite Dense Numeric Matrices
dppMatrix-class Positive Semi-definite Dense Numeric Matrices
dsCMatrix-class Numeric Symmetric Sparse (column compressed) Matrices
dsparseMatrix-class Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
dspMatrix-class Symmetric Dense Numeric Matrices
dsRMatrix-class Symmetric Sparse Compressed Row Matrices
dsTMatrix-class Numeric Symmetric Sparse (column compressed) Matrices
dsyMatrix-class Symmetric Dense Numeric Matrices
dtCMatrix-class Triangular, (compressed) sparse column matrices
dtpMatrix-class Packed triangular dense matrices
dtRMatrix-class Triangular Sparse Compressed Row Matrices
dtrMatrix-class Triangular, dense, numeric matrices
dtTMatrix-class Triangular, (compressed) sparse column matrices

-- E --

eigen,dgeMatrix,logical-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
eigen,dgeMatrix,missing-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
expand Expand a Decomposition into Factors
expand,LU-method LU Matrix Decompositions
expm Matrix exponential
expm,dgeMatrix-method Matrix exponential
expm,dMatrix-method Matrix exponential

-- F --

facmul Multiplication by Decomposition Factors
fitted,mer-method Mixed Model Representations and *mer Methods
fixed.effects Extract Fixed Effects
fixef Extract Fixed Effects
fixef,ANY-method Extract Fixed Effects
fixef,glmer-method Extract Fixed Effects
fixef,mer-method Extract Fixed Effects
formula,mer-method Mixed Model Representations and *mer Methods

-- G --

gamma,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
gamma,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
generalMatrix-class Class "generalMatrix" of General Matrices

-- H --

head,pedigree-method Class "pedigree"
Hilbert Generate a Hilbert matrix

-- I --

image,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
image,dgRMatrix-method Compressed, sparse, row-oriented numeric matrices
image,dgTMatrix-method Sparse matrices in triplet form
image,dsCMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
image,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
image,lgCMatrix-method Sparse logical matrices
image,lsCMatrix-method Sparse logical matrices
image,ltCMatrix-method Sparse logical matrices
image,ltTMatrix-method Sparse logical matrices
iMatrix-class Virtual Classes Not Yet Used
index-class Virtual Class "index" - Simple Class for Matrix Indices

-- K --

KNex Koenker-Ng Example Sparse Model Matrix and Response Vector
kronecker,ANY,Matrix-method Virtual Class "Matrix" Class of Matrices
kronecker,dgTMatrix,dgTMatrix-method Sparse matrices in triplet form
kronecker,dsparseMatrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
kronecker,Matrix,ANY-method Virtual Class "Matrix" Class of Matrices

-- L --

lCHMsimpl-class CHOLMOD-based Cholesky factorizations
lCHMsuper-class CHOLMOD-based Cholesky factorizations
lCholCMatrix-class Cholesky Decompositions of dsCMatrix Objects
ldenseMatrix-class Virtual Class "ldenseMatrix" of Dense Logical Matrices
ldiMatrix-class Class "ldiMatrix" of Diagonal Logical Matrices
lgamma,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
lgamma,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
lgCMatrix-class Sparse logical matrices
lgeMatrix-class Class "lgeMatrix" of General Dense Logical Matrices
lgRMatrix-class Sparse logical matrices
lgTMatrix-class Sparse logical matrices
lMatrix-class (Virtual) Class "dMatrix" of "double" Matrices
lmer Fit (Generalized) Linear Mixed-Effects Models
lmer,formula-method Fit (Generalized) Linear Mixed-Effects Models
lmer-class Mixed Model Representations and *mer Methods
log,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
log,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
logLik,mer-method Mixed Model Representations and *mer Methods
logLik,summary.mer-method Mixed Model Representations and *mer Methods
lsCMatrix-class Sparse logical matrices
lsparseMatrix-class Sparse logical matrices
lspMatrix-class Symmetric Dense Logical Matrices
lsRMatrix-class Sparse logical matrices
lsTMatrix-class Sparse logical matrices
lsyMatrix-class Symmetric Dense Logical Matrices
ltCMatrix-class Sparse logical matrices
ltpMatrix-class Triangular Dense Logical Matrices
ltRMatrix-class Sparse logical matrices
ltrMatrix-class Triangular Dense Logical Matrices
ltTMatrix-class Sparse logical matrices
lu Triangular Decomposition of a Square Matrix
lu,ddenseMatrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
lu,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
LU-class LU Matrix Decompositions

-- M --

Math,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
Math,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
Math,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
Math,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
Math2,dMatrix,numeric-method (Virtual) Class "dMatrix" of "double" Matrices
Matrix Construct a Classed Matrix
Matrix-class Virtual Class "Matrix" Class of Matrices
mcmcsamp Generate an MCMC sample
mcmcsamp,mer-method Generate an MCMC sample
mer-class Mixed Model Representations and *mer Methods

-- N --

norm Norm of a Matrix
norm,ddenseMatrix,character-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
norm,ddenseMatrix,missing-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
norm,dgeMatrix,character-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
norm,dgeMatrix,missing-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
norm,dspMatrix,character-method Symmetric Dense Numeric Matrices
norm,dspMatrix,missing-method Symmetric Dense Numeric Matrices
norm,dsyMatrix,character-method Symmetric Dense Numeric Matrices
norm,dsyMatrix,missing-method Symmetric Dense Numeric Matrices
norm,dtpMatrix,character-method Packed triangular dense matrices
norm,dtpMatrix,missing-method Packed triangular dense matrices
norm,dtrMatrix,character-method Triangular, dense, numeric matrices
norm,dtrMatrix,missing-method Triangular, dense, numeric matrices

-- P --

pBunchKaufman-class Cholesky and Bunch-Kaufman Decompositions
pCholesky-class Cholesky and Bunch-Kaufman Decompositions
pedigree Pedigree Constructor
pedigree-class Class "pedigree"
plot,coef.lmer-method Mixed Model Representations and *mer Methods
plot,ranef.lmer-method Mixed Model Representations and *mer Methods
pMatrix-class Permutation matrices

-- Q --

qqmath,ranef.lmer-method Mixed Model Representations and *mer Methods

-- R --

random.effects Extract Random Effects
ranef Extract Random Effects
ranef,ANY-method Extract Random Effects
ranef,lmer-method Extract Random Effects
ranef,mer-method Extract Random Effects
ranef-methods Extract Random Effects
ranef.lmer-class Mixed Model Representations and *mer Methods
rbind2,ddenseMatrix,ddenseMatrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
rbind2,ddenseMatrix,matrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
rbind2,ddenseMatrix,numeric-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
rbind2,dsparseMatrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
rbind2,dsparseMatrix,matrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
rbind2,dsparseMatrix,numeric-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
rbind2,matrix,ddenseMatrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
rbind2,matrix,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
rbind2,Matrix,Matrix-method Virtual Class "Matrix" Class of Matrices
rbind2,Matrix,missing-method Virtual Class "Matrix" Class of Matrices
rbind2,Matrix,NULL-method Virtual Class "Matrix" Class of Matrices
rbind2,NULL,Matrix-method Virtual Class "Matrix" Class of Matrices
rbind2,numeric,ddenseMatrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
rbind2,numeric,dsparseMatrix-method Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
rcond Estimate the Reciprocal Condition Number
rcond,ddenseMatrix,character-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
rcond,ddenseMatrix,missing-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
rcond,dgeMatrix,character-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
rcond,dgeMatrix,missing-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
rcond,dpoMatrix,character-method Positive Semi-definite Dense Numeric Matrices
rcond,dpoMatrix,missing-method Positive Semi-definite Dense Numeric Matrices
rcond,dppMatrix,character-method Positive Semi-definite Dense Numeric Matrices
rcond,dppMatrix,missing-method Positive Semi-definite Dense Numeric Matrices
rcond,dspMatrix,character-method Symmetric Dense Numeric Matrices
rcond,dspMatrix,missing-method Symmetric Dense Numeric Matrices
rcond,dsyMatrix,character-method Symmetric Dense Numeric Matrices
rcond,dsyMatrix,missing-method Symmetric Dense Numeric Matrices
rcond,dtpMatrix,character-method Packed triangular dense matrices
rcond,dtpMatrix,missing-method Packed triangular dense matrices
rcond,dtrMatrix,character-method Triangular, dense, numeric matrices
rcond,dtrMatrix,missing-method Triangular, dense, numeric matrices
readHB Read and write external matrix formats
readMM Read and write external matrix formats
resid,mer-method Mixed Model Representations and *mer Methods
residuals,mer-method Mixed Model Representations and *mer Methods
round,dgCMatrix,numeric-method Compressed, sparse, column-oriented numeric matrices
round,dMatrix,numeric-method (Virtual) Class "dMatrix" of "double" Matrices
rowMeans,CsparseMatrix-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
rowMeans,denseMatrix-method Virtual Class "denseMatrix" of All Dense Matrices
rowMeans,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
rowMeans,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
rowMeans,dgTMatrix-method Sparse matrices in triplet form
rowMeans,sparseMatrix-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
rowMeans,TsparseMatrix-method Class "TsparseMatrix" of Sparse Matrices in Triplet Form
rowSums,CsparseMatrix-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
rowSums,denseMatrix-method Virtual Class "denseMatrix" of All Dense Matrices
rowSums,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
rowSums,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
rowSums,dgTMatrix-method Sparse matrices in triplet form
rowSums,sparseMatrix-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
rowSums,TsparseMatrix-method Class "TsparseMatrix" of Sparse Matrices in Triplet Form
RsparseMatrix-class Class "RsparseMatrix" of Sparse Matrices in Column-compressed Form

-- S --

Schur Schur Decomposition of a Matrix
Schur,ddenseMatrix,logical-method Schur Decomposition of a Matrix
Schur,ddenseMatrix,missing-method Schur Decomposition of a Matrix
Schur,dgeMatrix,logical-method Schur Decomposition of a Matrix
Schur,dgeMatrix,missing-method Schur Decomposition of a Matrix
show,ddenseMatrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
show,denseMatrix-method Virtual Class "denseMatrix" of All Dense Matrices
show,diagonalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
show,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
show,dsyMatrix-method Symmetric Dense Numeric Matrices
show,dtrMatrix-method Triangular, dense, numeric matrices
show,Matrix-method Virtual Class "Matrix" Class of Matrices
show,mer-method Mixed Model Representations and *mer Methods
show,pedigree-method Class "pedigree"
show,sparseMatrix-method Virtual Class "sparseMatrix" - Mother of Sparse Matrices
show,VarCorr-method Class "VarCorr"
signif,dgCMatrix,numeric-method Compressed, sparse, column-oriented numeric matrices
signif,dMatrix,numeric-method (Virtual) Class "dMatrix" of "double" Matrices
simulate,mer-method Mixed Model Representations and *mer Methods
sleepstudy Reaction times in a sleep deprivation study
solve,ddenseMatrix,ANY-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
solve,ddenseMatrix,missing-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
solve,dgeMatrix,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
solve,dgeMatrix,matrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
solve,dgeMatrix,missing-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
solve,dgeMatrix,numeric-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
solve,dMatrix,integer-method (Virtual) Class "dMatrix" of "double" Matrices
solve,dpoMatrix,dgeMatrix-method Positive Semi-definite Dense Numeric Matrices
solve,dpoMatrix,matrix-method Positive Semi-definite Dense Numeric Matrices
solve,dpoMatrix,missing-method Positive Semi-definite Dense Numeric Matrices
solve,dpoMatrix,numeric-method Positive Semi-definite Dense Numeric Matrices
solve,dppMatrix,dgeMatrix-method Positive Semi-definite Dense Numeric Matrices
solve,dppMatrix,integer-method Positive Semi-definite Dense Numeric Matrices
solve,dppMatrix,matrix-method Positive Semi-definite Dense Numeric Matrices
solve,dppMatrix,missing-method Positive Semi-definite Dense Numeric Matrices
solve,dppMatrix,numeric-method Positive Semi-definite Dense Numeric Matrices
solve,dsCMatrix,dgeMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
solve,dsCMatrix,matrix-method Numeric Symmetric Sparse (column compressed) Matrices
solve,dspMatrix,dgeMatrix-method Symmetric Dense Numeric Matrices
solve,dspMatrix,integer-method Symmetric Dense Numeric Matrices
solve,dspMatrix,matrix-method Symmetric Dense Numeric Matrices
solve,dspMatrix,missing-method Symmetric Dense Numeric Matrices
solve,dspMatrix,numeric-method Symmetric Dense Numeric Matrices
solve,dsyMatrix,dgeMatrix-method Symmetric Dense Numeric Matrices
solve,dsyMatrix,matrix-method Symmetric Dense Numeric Matrices
solve,dsyMatrix,missing-method Symmetric Dense Numeric Matrices
solve,dtCMatrix,dgeMatrix-method Triangular, (compressed) sparse column matrices
solve,dtCMatrix,matrix-method Triangular, (compressed) sparse column matrices
solve,dtCMatrix,missing-method Triangular, (compressed) sparse column matrices
solve,dtCMatrix,numeric-method Triangular, (compressed) sparse column matrices
solve,dtpMatrix,matrix-method Packed triangular dense matrices
solve,dtpMatrix,missing-method Packed triangular dense matrices
solve,dtrMatrix,dgeMatrix-method Triangular, dense, numeric matrices
solve,dtrMatrix,matrix-method Triangular, dense, numeric matrices
solve,dtrMatrix,missing-method Triangular, dense, numeric matrices
solve,lCholCMatrix,lgCMatrix-method Cholesky Decompositions of dsCMatrix Objects
solve,lCholCMatrix,missing-method Cholesky Decompositions of dsCMatrix Objects
solve,Matrix,numeric-method Virtual Class "Matrix" Class of Matrices
solve,pMatrix,missing-method Permutation matrices
sparseMatrix-class Virtual Class "sparseMatrix" - Mother of Sparse Matrices
Subassign-methods}% <- nicer to use in \link{. Methods for "[<-" - Assigning to Subsets for 'Matrix'
Summary,dMatrix-method (Virtual) Class "dMatrix" of "double" Matrices
summary,mer-method Mixed Model Representations and *mer Methods
summary,summary.mer-method Mixed Model Representations and *mer Methods
summary.lmer-class Mixed Model Representations and *mer Methods
summary.mer-class Mixed Model Representations and *mer Methods
symmetricMatrix-class Virtual Class of Symmetric Matrices in package:Matrix

-- T --

t,CsparseMatrix-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
t,ddenseMatrix-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
t,dgCMatrix-method Compressed, sparse, column-oriented numeric matrices
t,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
t,dgRMatrix-method Compressed, sparse, row-oriented numeric matrices
t,dgTMatrix-method Sparse matrices in triplet form
t,diagonalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
t,dppMatrix-method Positive Semi-definite Dense Numeric Matrices
t,dsCMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
t,dspMatrix-method Symmetric Dense Numeric Matrices
t,dsTMatrix-method Numeric Symmetric Sparse (column compressed) Matrices
t,dsyMatrix-method Symmetric Dense Numeric Matrices
t,dtCMatrix-method Triangular, (compressed) sparse column matrices
t,dtpMatrix-method Packed triangular dense matrices
t,dtrMatrix-method Triangular, dense, numeric matrices
t,dtTMatrix-method Triangular, (compressed) sparse column matrices
t,lCholCMatrix-method Cholesky Decompositions of dsCMatrix Objects
t,lgCMatrix-method Sparse logical matrices
t,lgeMatrix-method Class "lgeMatrix" of General Dense Logical Matrices
t,lgTMatrix-method Sparse logical matrices
t,lsCMatrix-method Sparse logical matrices
t,lspMatrix-method Symmetric Dense Logical Matrices
t,lsyMatrix-method Symmetric Dense Logical Matrices
t,ltCMatrix-method Sparse logical matrices
t,ltpMatrix-method Triangular Dense Logical Matrices
t,ltrMatrix-method Triangular Dense Logical Matrices
t,Matrix-method Virtual Class "Matrix" Class of Matrices
t,pMatrix-method Permutation matrices
tail,pedigree-method Class "pedigree"
tcrossprod Cross-product of transpose
tcrossprod,CsparseMatrix,missing-method Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form
tcrossprod,ddenseMatrix,missing-method Virtual Class "ddenseMatrix" of Numeric Dense Matrices
tcrossprod,ddiMatrix,ddiMatrix-method Class "ddiMatrix" of Diagonal Numeric Matrices
tcrossprod,dgCMatrix,missing-method Cross-product of transpose
tcrossprod,dgeMatrix,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
tcrossprod,dgeMatrix,matrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
tcrossprod,dgeMatrix,missing-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
tcrossprod,dgeMatrix,numeric-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
tcrossprod,dgTMatrix,missing-method Cross-product of transpose
tcrossprod,diagonalMatrix,sparseMatrix-method Class "diagonalMatrix" of Diagonal Matrices
tcrossprod,lgCMatrix,missing-method Sparse logical matrices
tcrossprod,lgTMatrix,missing-method Sparse logical matrices
tcrossprod,lsparseMatrix,missing-method Sparse logical matrices
tcrossprod,matrix,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
tcrossprod,matrix,missing-method Cross-product of transpose
tcrossprod,numeric,dgeMatrix-method Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
tcrossprod,numeric,missing-method Cross-product of transpose
tcrossprod,sparseMatrix,diagonalMatrix-method Class "diagonalMatrix" of Diagonal Matrices
tcrossprod,TsparseMatrix,missing-method Class "TsparseMatrix" of Sparse Matrices in Triplet Form
tcrossprod-methods Cross-product of transpose
terms,lmer-method Mixed Model Representations and *mer Methods
triangularMatrix-class Virtual Class of Triangular Matrices in package:Matrix
tril Extract bands of a matrix
tril,CsparseMatrix-method Extract bands of a matrix
tril-methods Extract bands of a matrix
triu Extract bands of a matrix
triu,CsparseMatrix-method Extract bands of a matrix
triu-methods Extract bands of a matrix
TsparseMatrix-class Class "TsparseMatrix" of Sparse Matrices in Triplet Form

-- U --

unname,Matrix-method Virtual Class "Matrix" Class of Matrices
unpack Full Storage Representation of Packed Matrices
unpack,dspMatrix-method Symmetric Dense Numeric Matrices
unpack,dtpMatrix-method Packed triangular dense matrices
update,mer-method Mixed Model Representations and *mer Methods

-- V --

VarCorr Extract variance and correlation components
VarCorr,mer-method Extract variance and correlation components
VarCorr-class Class "VarCorr"
vcov,mer-method Mixed Model Representations and *mer Methods
vcov,summary.mer-method Mixed Model Representations and *mer Methods

-- W --

with,lmer-method Mixed Model Representations and *mer Methods
writeHB Read and write external matrix formats
writeHB,dgCMatrix-method Read and write external matrix formats
writeHB,dgTMatrix-method Read and write external matrix formats
writeHB,dsCMatrix-method Read and write external matrix formats
writeHB,dsTMatrix-method Read and write external matrix formats
writeMM Read and write external matrix formats
writeMM,dgCMatrix-method Read and write external matrix formats
writeMM,dgTMatrix-method Read and write external matrix formats
writeMM,dsCMatrix-method Read and write external matrix formats
writeMM,dsTMatrix-method Read and write external matrix formats

-- Z --

zMatrix-class Virtual Classes Not Yet Used

-- misc --

[,denseMatrix,index,index,logical-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,denseMatrix,index,missing,logical-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,denseMatrix,missing,index,logical-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,dMatrix,lMatrix,missing,ANY-method (Virtual) Class "dMatrix" of "double" Matrices
[,dMatrix,logical,missing,ANY-method (Virtual) Class "dMatrix" of "double" Matrices
[,Matrix,ANY,ANY,ANY-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,Matrix,index,index,missing-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,Matrix,index,missing,missing-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,Matrix,lMatrix,missing,ANY-method Virtual Class "Matrix" Class of Matrices
[,Matrix,logical,missing,ANY-method Virtual Class "Matrix" Class of Matrices
[,Matrix,missing,index,missing-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,Matrix,missing,missing,ANY-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,sparseMatrix,index,index,logical-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,sparseMatrix,index,missing,logical-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,sparseMatrix,missing,index,logical-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,TsparseMatrix,index,index,logical-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,TsparseMatrix,index,missing,logical-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[,TsparseMatrix,missing,index,logical-method Methods for "[": Extraction or Subsetting in Package 'Matrix'
[-methods Methods for "[": Extraction or Subsetting in Package 'Matrix'
[<-,denseMatrix,index,index,numeric-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<-,denseMatrix,index,missing,numeric-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<-,denseMatrix,missing,index,numeric-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<-,dgCMatrix,index,index,numeric-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<-,dgCMatrix,index,missing,numeric-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<-,dgCMatrix,missing,index,numeric-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<-,dgTMatrix,index,index,numeric-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<-,dgTMatrix,index,missing,numeric-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<-,dgTMatrix,missing,index,numeric-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<-,Matrix,ANY,ANY,ANY-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<-,Matrix,missing,missing,ANY-method Methods for "[<-" - Assigning to Subsets for 'Matrix'
[<--methods Methods for "[<-" - Assigning to Subsets for 'Matrix'