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Multivariate Pattern Analysis in Python |
Inheritance diagram for mvpa.atlases.base:
Base classes for Anatomy atlases support
- major optimization. Now code is sloppy and slow – plenty of checks etc
mvpa.atlases.base module contains support for various atlases
group Base: | BaseAtlas XMLBasedAtlas Label Level LabelsLevel |
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group Talairach: | |
PyMVPAAtlas LabelsAtlas ReferencesAtlas | |
group Exceptions: | |
XMLAtlasException |
Bases: object
Base class for the atlases.
Create an atlas object based on the... XXX
Bases: object
Represents a label. Just to bring all relevant information together
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Returns abbreviated version if such is available
Bases: mvpa.atlases.base.PyMVPAAtlas
Atlas which provides labels for the given coordinate
Initialize instance of PyMVPAAtlas
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Return labels for the given voxel at specified levels specified by index
Bases: mvpa.atlases.base.Level
Level of labels.
XXX extend
Return labels descr of which matches the string
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Bases: mvpa.atlases.base.XMLBasedAtlas
Base class for PyMVPA atlases, such as LabelsAtlas and ReferenceAtlas
Initialize instance of PyMVPAAtlas
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Bases: mvpa.atlases.base.PyMVPAAtlas
Atlas which provides references to the other atlases.
Example: the atlas which has references to the closest points (closest Gray, etc) in another atlas.
Initialize ReferencesAtlas
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Set desired maximal distance for the reference
Set the level which will be queried
Bases: mvpa.atlases.base.Level
Level which carries reference points
Bases: exceptions.Exception
Exception to be thrown if smth goes wrong dealing with XML based atlas
Bases: mvpa.atlases.base.BaseAtlas
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Return labels for the given spatial point at specified levels
Function takes care about first transforming the point into the voxel space
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Set coordT transformation.
spaceT needs to be adjusted since we glob those two transformations together