private class AminoPolymer.Bridge
extends java.lang.Object
Modifier and Type | Field and Description |
---|---|
protected Atom |
a |
protected Atom |
b |
protected boolean |
isAntiparallel |
protected int[][] |
ladder |
Modifier | Constructor and Description |
---|---|
protected |
AminoPolymer.Bridge(Atom a,
Atom b,
java.util.Map<int[][],java.lang.Boolean> htLadders) |
Modifier and Type | Method and Description |
---|---|
protected boolean |
addBridge(AminoPolymer.Bridge bridge,
java.util.Map<int[][],java.lang.Boolean> htLadders) |
private void |
addLadder(java.util.Map<int[][],java.lang.Boolean> htLadders) |
private boolean |
canAdd(AminoPolymer.Bridge bridge) |
private void |
extendLadder(int index1,
int index2) |
java.lang.String |
toString() |
protected Atom a
protected Atom b
protected int[][] ladder
protected boolean isAntiparallel
private void addLadder(java.util.Map<int[][],java.lang.Boolean> htLadders)
public java.lang.String toString()
toString
in class java.lang.Object
protected boolean addBridge(AminoPolymer.Bridge bridge, java.util.Map<int[][],java.lang.Boolean> htLadders)
private boolean canAdd(AminoPolymer.Bridge bridge)
private void extendLadder(int index1, int index2)