Here is a list of all class members with links to the classes they belong to:
- r -
- R
: BALL::Constant
- r
: BALL::FDPB::FastAtomStruct
- r0
: BALL::MMFF94StretchBend::Stretch
, BALL::QuadraticBondStretch::Values
, BALL::MMFF94StretchParameters::EmpiricalBondData
- r0_
: BALL::QuadraticBondStretch
- r0_normal
: BALL::MMFF94StretchParameters::BondData
- r0_sbmb
: BALL::MMFF94StretchParameters::BondData
- r1_
: BALL::ChemScoreMetal
- r1_offset_
: BALL::BuriedPolar
, BALL::Lipophilic
- r2_
: BALL::ChemScoreMetal
- r2_offset_
: BALL::BuriedPolar
, BALL::Lipophilic
- r_direction_
: BALL::VIEW::LightSource
- R_ij_o_
: BALL::PairExpRDFIntegrator
- r_max_
: BALL::ReducedSurface
- r_min
: BALL::CharmmEEF1::Values
- R_min_
: BALL::CharmmEEF1
- r_position_
: BALL::VIEW::LightSource
- Ra
: BALL::Element
- RAD_PER_DEG
: BALL::Constant
- RadialDistributionFunction()
: BALL::RadialDistributionFunction
- radii
: BALL::MMFF94StretchParameters
- radii_
: BALL::ElectrostaticPotentialCalculator
- RADIUM
: BALL::Element
- radius
: BALL::SolventAtomDescriptor
, BALL::BindingPocketProcessor::Sphere_
, BALL::TCircle3< T >
, BALL::TSphere3< T >
, BALL::JohnsonBoveyShiftProcessor::Ring
- radius_
: BALL::Atom
, BALL::VIEW::HBondModelProcessor
, BALL::VIEW::Tube
, BALL::VIEW::TwoColoredTube
, BALL::BindingPocketProcessor
- radius_a_
: BALL::GeometricFit
- radius_b_
: BALL::GeometricFit
- RADIUS_CARBON
: BALL::BindingPocketProcessor::Option
, BALL::BindingPocketProcessor::Default
- radius_factor_
: BALL::VIEW::AddVanDerWaalsModel
- RADIUS_HYDROGEN
: BALL::BindingPocketProcessor::Option
, BALL::BindingPocketProcessor::Default
- RADIUS_NITROGEN
: BALL::BindingPocketProcessor::Option
, BALL::BindingPocketProcessor::Default
- radius_of_torus_
: BALL::RSEdge
- radius_offset_
: BALL::SurfaceProcessor
- RADIUS_OXYGEN
: BALL::BindingPocketProcessor::Option
, BALL::BindingPocketProcessor::Default
- radius_processor_
: BALL::VIEW::DockDialog
, BALL::VIEW::FDPBDialog
- radius_rule_processor_
: BALL::VIEW::DockDialog
, BALL::VIEW::FDPBDialog
- RADIUS_SULFUR
: BALL::BindingPocketProcessor::Option
, BALL::BindingPocketProcessor::Default
- RadiusRuleProcessor()
: BALL::RadiusRuleProcessor
- RADON
: BALL::Element
- RANDOM
: BALL::VIEW::DockingController
- RandomAccessIterator()
: BALL::RandomAccessIterator< Container, DataType, Position, Traits >
- RandomCoilShiftProcessor()
: BALL::RandomCoilShiftProcessor
- randomDouble()
: BALL::RandomNumberGenerator
- RandomEvaluation()
: BALL::RandomEvaluation
- randomGaussian()
: BALL::RandomNumberGenerator
- randomInteger()
: BALL::RandomNumberGenerator
- RandomNumberGenerator()
: BALL::RandomNumberGenerator
- randomUniform()
: BALL::RandomNumberGenerator
- Range
: BALL::TAngle< T >
- range_
: BALL::PiecewiseFunction
- RANGE__SIGNED
: BALL::TAngle< T >
- RANGE__UNLIMITED
: BALL::TAngle< T >
- RANGE__UNSIGNED
: BALL::TAngle< T >
- RANK_1
: BALL::ShiftedLVMMMinimizer
- RANK_2
: BALL::ShiftedLVMMMinimizer
- RATIO_OF_SHIFT_PARAMS
: BALL::ShiftedLVMMMinimizer
- RaytraceableContourSurfaceDialog()
: BALL::VIEW::RaytraceableContourSurfaceDialog
- RaytraceableGrid()
: BALL::VIEW::RaytraceableGrid
- RaytraceableGridController()
: BALL::VIEW::RaytraceableGridController
- Rb
: BALL::Element
- rb_
: BALL::VIEW::Scene
- rbegin()
: BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >
, BALL::BidirectionalIterator< Container, DataType, Position, Traits >
, BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits >
, BALL::RandomAccessIterator< Container, DataType, Position, Traits >
, BALL::PDBRecords
, BALL::Gradient
- rbeginBond()
: BALL::Atom
- rbeginChildComposite()
: BALL::Composite
- rbeginComposite()
: BALL::Composite
- rdbuf()
: BALL::LogStream
- rdf_
: BALL::RDFIntegrator
, BALL::RDFSection
- RDF_FILENAME
: BALL::Pair6_12InteractionEnergyProcessor::Option
, BALL::Pair6_12InteractionEnergyProcessor::Default
, BALL::PairExpInteractionEnergyProcessor::Option
, BALL::PairExpInteractionEnergyProcessor::Default
- rdf_indices_
: BALL::RDFParameter
- rdf_integrator_
: BALL::Pair6_12InteractionEnergyProcessor
- rdf_list_
: BALL::RDFParameter
- rdf_parameter_
: BALL::Pair6_12InteractionEnergyProcessor
, BALL::PairExpInteractionEnergyProcessor
- RDFIntegrator()
: BALL::RDFIntegrator
- RDFParameter()
: BALL::RDFParameter
- RDFSection()
: BALL::RDFSection
- Re
: BALL::Element
- reacting_center_status
: BALL::MOLFile::BondStruct
- reaction_component_number
: BALL::MOLFile::AtomStruct
- reaction_component_type
: BALL::MOLFile::AtomStruct
- reaction_field_energy_
: BALL::FDPB
- reactTo()
: BALL::VIEW::PyWidget
- reactToKeyEvent_()
: BALL::VIEW::EditableScene
- reactToMessages_()
: BALL::VIEW::MolecularControl
- read()
: BALL::PropertyManager
, BALL::Selectable
, BALL::PreciseTime
, BALL::TimeStamp
, BALL::BitVector
, BALL::Options
, BALL::Bruker1DFile
, BALL::Bruker2DFile
, BALL::DCDFile
, BALL::DSN6File
, BALL::GAMESSDatFile
, BALL::GAMESSLogFile
, BALL::GenericMolFile
, BALL::HINFile
, BALL::INIFile
, BALL::JCAMPFile
, BALL::KCFFile
, BALL::MOL2File
, BALL::MOLFile
, BALL::PDBFile
, BALL::SDFile
, BALL::TrajectoryFile
, BALL::TRRFile
, BALL::XYZFile
, BALL::TVector3< T >
, BALL::GAFFCESParser
- read_all_pdb_models_
: BALL::VIEW::MolecularFileDialog
- read_atoms_
: BALL::SDFile
- read_start_
: BALL::GAFFCESParser
- readAndInitBondAnglesFromFile_()
: BALL::HybridisationProcessor
- readAtomicPolarizabilities_()
: BALL::SimpleBase
- readAtomLine_()
: BALL::MOLFile
- readAtomPenalties_()
: BALL::AssignBondOrderProcessor
- readAtomSection_()
: BALL::MOL2File
- readAtomTypeSmartsFromFile_()
: BALL::HybridisationProcessor
- readBondLengthsFromFile_()
: BALL::BuildBondsProcessor
- readBondLine_()
: BALL::MOLFile
- readBondSection_()
: BALL::MOL2File
- readCountsLine_()
: BALL::MOLFile
- readCTAB_()
: BALL::MOLFile
- readDCDFile()
: BALL::ConformationSet
- readDELIMITER_()
: BALL::KCFFile
- readDockResult()
: BALL::DockResult
- readEDGE_()
: BALL::KCFFile
- readElectronAffinities_()
: BALL::PartialChargeProcessor
- readEmpiricalParameters()
: BALL::MMFF94StretchParameters
, BALL::MMFF94StretchBendParameters
, BALL::MMFF94ESParameters
- readENTRY_()
: BALL::KCFFile
- readEntryInformation_()
: BALL::NMRStarFile
- readFiles()
: BALL::VIEW::MolecularFileDialog
- readFirstRecord()
: BALL::PDBFile
- readFloat_()
: BALL::DCDFile
- readFromFile()
: BALL::SnapShotManager
- readFromString()
: BALL::VIEW::Camera
- readHeader()
: BALL::DCDFile
, BALL::DSN6File
, BALL::TrajectoryFile
- readHeaderValue_()
: BALL::DSN6File
- readHINFile()
: BALL::VIEW::MolecularFileDialog
- readInputFromSocket_()
: BALL::TCPTransfer
- readInvalidRecord()
: BALL::PDBFile
- readIonizationEnergies_()
: BALL::PartialChargeProcessor
- readLights_()
: BALL::VIEW::Scene
- readLine()
: BALL::LineBasedFile
, BALL::PDBFile
- readMOL2File()
: BALL::VIEW::MolecularFileDialog
- readMoleculeSection_()
: BALL::MOL2File
- readMOLFile()
: BALL::VIEW::MolecularFileDialog
- readMolSystem_()
: BALL::NMRStarFile
- readMSMSFile()
: BALL::TSurface< T >
- readNextHeader()
: BALL::TRRFile
- readNextRecord()
: BALL::PDBFile
- readNODE_()
: BALL::KCFFile
- readObject()
: BALL::PersistenceManager
- readObjectArray()
: BALL::PersistenceManager
- readObjectPointer()
: BALL::PersistenceManager
- readObjectPointerArray()
: BALL::PersistenceManager
- readObjectReference()
: BALL::PersistenceManager
- readObjectSmartPointer()
: BALL::PersistenceManager
- readOptionFile()
: BALL::Options
- readOptions_()
: BALL::AssignBondOrderProcessor
- readParameters()
: BALL::MMFF94ParametersBase
- readPDBFile()
: BALL::VIEW::MolecularFileDialog
- readPreferenceEntries()
: BALL::VIEW::MainControlPreferences
, BALL::VIEW::PluginDialog
, BALL::VIEW::PythonSettings
, BALL::VIEW::PreferencesEntry
- readPrimitive()
: BALL::PersistenceManager
- readPropertyBlock_()
: BALL::SDFile
- readRecords()
: BALL::PDBFile
- readSampleConditions_()
: BALL::NMRStarFile
- readScalingFactors()
: BALL::GeneralizedBornModel
- readSCWRLBackboneDependentLibraryFile_()
: BALL::SCWRLRotamerFile
- readSCWRLBackboneIndependentLibraryFile_()
: BALL::SCWRLRotamerFile
- readSDFile()
: BALL::VIEW::MolecularFileDialog
- readSetSection_()
: BALL::MOL2File
- readShiftReferences_()
: BALL::NMRStarFile
- readShifts_()
: BALL::NMRStarFile
- readShortcutsFromFile()
: BALL::VIEW::ShortcutRegistry
- readSize_()
: BALL::DCDFile
- readStorableObject()
: BALL::PersistenceManager
- readSubstructureSection_()
: BALL::MOL2File
- readUnknownRecord()
: BALL::PDBFile
- readVector_()
: BALL::DCDFile
- readXYZFile()
: BALL::VIEW::MolecularFileDialog
- REAL
: BALL::RegularExpression
- real_renderer_
: BALL::VIEW::TilingRenderer
- rebuild_
: BALL::VIEW::Representation
- REBUILD_DISPLAY_LISTS
: BALL::VIEW::SceneMessage
, BALL::VIEW::GLRenderer
- rebuildAllRepresentations()
: BALL::VIEW::RepresentationManager
- rec_edges_
: BALL::SmartsParser
- rec_matches_
: BALL::SmartsMatcher
- rec_struct_core_
: BALL::SmartsMatcher::RecStruct_
- rec_struct_pool_
: BALL::SmartsMatcher::RecStructPool_
- receive_updates_
: BALL::VIEW::RenderSetup
- received_bytes_
: BALL::TCPTransfer
- received_composite_
: BALL::VIEW::ServerWidget::BALLViewServer
- receiver_
: BALL::VIEW::InputDeviceDriver
- receiverLock
: BALL::VIEW::InputDeviceDriver
- receivesBufferUpdates()
: BALL::VIEW::RenderSetup
- receptor_
: BALL::NonpolarSolvation
, BALL::RotationalEntropyLoss
- receptor_rings_
: BALL::AromaticRingStacking
- recieve()
: BALL::RingPerceptionProcessor::TNode_
- recieve_buffer
: BALL::RingPerceptionProcessor::TNode_
- Reciprocal()
: BALL::Reciprocal< Function, DataType >
- reconstructFragment()
: BALL::ReconstructFragmentProcessor
- ReconstructFragmentProcessor()
: BALL::ReconstructFragmentProcessor
- record_animation_action_
: BALL::VIEW::Scene
- record_fields_
: BALL::PDBFile
- record_name
: BALL::PDB::RecordANISOU
, BALL::PDB::RecordATOM
, BALL::PDB::RecordAUTHOR
, BALL::PDB::RecordCAVEAT
, BALL::PDB::RecordCISPEP
, BALL::PDB::RecordCOMPND
, BALL::PDB::RecordCONECT
, BALL::PDB::RecordCRYST1
, BALL::PDB::RecordDBREF
, BALL::PDB::RecordEND
, BALL::PDB::RecordENDMDL
, BALL::PDB::RecordEXPDTA
, BALL::PDB::RecordFORMUL
, BALL::PDB::RecordFTNOTE
, BALL::PDB::RecordHEADER
, BALL::PDB::RecordHELIX
, BALL::PDB::RecordHET
, BALL::PDB::RecordHETATM
, BALL::PDB::RecordHETNAM
, BALL::PDB::RecordHETSYN
, BALL::PDB::RecordHYDBND
, BALL::PDB::RecordJRNL
, BALL::PDB::RecordKEYWDS
, BALL::PDB::RecordLINK
, BALL::PDB::RecordMASTER
, BALL::PDB::RecordMODEL
, BALL::PDB::RecordMODRES
, BALL::PDB::RecordMTRIX1
, BALL::PDB::RecordMTRIX2
, BALL::PDB::RecordMTRIX3
, BALL::PDB::RecordOBSLTE
, BALL::PDB::RecordORIGX1
, BALL::PDB::RecordORIGX2
, BALL::PDB::RecordORIGX3
, BALL::PDB::RecordREMARK
, BALL::PDB::RecordREVDAT
, BALL::PDB::RecordSCALE1
, BALL::PDB::RecordSCALE2
, BALL::PDB::RecordSCALE3
, BALL::PDB::RecordSEQADV
, BALL::PDB::RecordSEQRES
, BALL::PDB::RecordSHEET
, BALL::PDB::RecordSIGATM
, BALL::PDB::RecordSIGUIJ
, BALL::PDB::RecordSITE
, BALL::PDB::RecordSLTBRG
, BALL::PDB::RecordSOURCE
, BALL::PDB::RecordSPRSDE
, BALL::PDB::RecordSSBOND
, BALL::PDB::RecordTER
, BALL::PDB::RecordTITLE
, BALL::PDB::RecordTURN
, BALL::PDB::RecordTVECT
- record_serial_number
: BALL::PDB::RecordCISPEP
- record_type
: BALL::PDB::RecordTypeFormat
, BALL::PDB::RecordANISOU
, BALL::PDB::RecordATOM
, BALL::PDB::RecordAUTHOR
, BALL::PDB::RecordCAVEAT
, BALL::PDB::RecordCISPEP
, BALL::PDB::RecordCOMPND
, BALL::PDB::RecordCONECT
, BALL::PDB::RecordCRYST1
, BALL::PDB::RecordDBREF
, BALL::PDB::RecordEND
, BALL::PDB::RecordENDMDL
, BALL::PDB::RecordEXPDTA
, BALL::PDB::RecordFORMUL
, BALL::PDB::RecordFTNOTE
, BALL::PDB::RecordHEADER
, BALL::PDB::RecordHELIX
, BALL::PDB::RecordHET
, BALL::PDB::RecordHETATM
, BALL::PDB::RecordHETNAM
, BALL::PDB::RecordHETSYN
, BALL::PDB::RecordHYDBND
, BALL::PDB::RecordJRNL
, BALL::PDB::RecordKEYWDS
, BALL::PDB::RecordLINK
, BALL::PDB::RecordMASTER
, BALL::PDB::RecordMODEL
, BALL::PDB::RecordMODRES
, BALL::PDB::RecordMTRIX1
, BALL::PDB::RecordMTRIX2
, BALL::PDB::RecordMTRIX3
, BALL::PDB::RecordOBSLTE
, BALL::PDB::RecordORIGX1
, BALL::PDB::RecordORIGX2
, BALL::PDB::RecordORIGX3
, BALL::PDB::RecordREMARK
, BALL::PDB::RecordREVDAT
, BALL::PDB::RecordSCALE1
, BALL::PDB::RecordSCALE2
, BALL::PDB::RecordSCALE3
, BALL::PDB::RecordSEQADV
, BALL::PDB::RecordSEQRES
, BALL::PDB::RecordSHEET
, BALL::PDB::RecordSIGATM
, BALL::PDB::RecordSIGUIJ
, BALL::PDB::RecordSITE
, BALL::PDB::RecordSLTBRG
, BALL::PDB::RecordSOURCE
, BALL::PDB::RecordSPRSDE
, BALL::PDB::RecordSSBOND
, BALL::PDB::RecordTER
, BALL::PDB::RecordTITLE
, BALL::PDB::RecordTURN
, BALL::PDB::RecordTVECT
- RecordHELIX()
: BALL::PDB::RecordHELIX
- recording_
: BALL::VIEW::TestFramework
- RecordMASTER()
: BALL::PDB::RecordMASTER
- records_
: BALL::PDBRecords
- RecordSEQRES()
: BALL::PDB::RecordSEQRES
- RecordSHEET()
: BALL::PDB::RecordSHEET
- RecordSSBOND()
: BALL::PDB::RecordSSBOND
- RecordTURN()
: BALL::PDB::RecordTURN
- RecStruct_()
: BALL::SmartsMatcher::RecStruct_
- RecStructCore_()
: BALL::SmartsMatcher::RecStructCore_
- RecStructPool_()
: BALL::SmartsMatcher::RecStructPool_
- recurseGeneration_()
: BALL::VIEW::MolecularControl
- recursion_()
: BALL::ConnectivityBase
- recursive_
: BALL::SmartsParser::SPNode
, BALL::SmartsParser
- RECV__ERROR
: BALL::TCPTransfer
- red_
: BALL::VIEW::ColorRGBA
- RED_CHANNEL
: BALL::VIEW::ChannelFormat
- redock_()
: BALL::VIEW::DockResultDialog
- redock_partner1_
: BALL::VIEW::DockResultDialog
- redock_partner2_
: BALL::VIEW::DockResultDialog
- REDRAW
: BALL::VIEW::SceneMessage
- redrawAllRepresentations()
: BALL::VIEW::MainControl
- reduced_surface_
: BALL::SolventAccessibleSurface
, BALL::SolventExcludedSurface
- ReducedSurface
: BALL::RSEdge
, BALL::RSFace
, BALL::RSVertex
, BALL::ReducedSurface
- reduceSelection_()
: BALL::VIEW::MainControl
- REESTIMATE_BONDORDERS_RINGS
: BALL::BuildBondsProcessor::Option
, BALL::BuildBondsProcessor::Default
- reestimateBondOrdersRings_()
: BALL::BuildBondsProcessor
- Reference
: BALL::PDBRecords
- reference
: BALL::BaseIterator< Container, DataType, Position, Traits >
, BALL::BidirectionalIterator< Container, DataType, Position, Traits >
, BALL::ForwardIterator< Container, DataType, Position, Traits >
, BALL::RandomAccessIterator< Container, DataType, Position, Traits >
, BALL::HashSet< Key >
, BALL::TRegularData1D< ValueType >
, BALL::TRegularData2D< ValueType >
, BALL::TRegularData3D< ValueType >
, BALL::PDBRecords
, BALL::VIEW::CompositeManager
, BALL::NMRAtomDataSet
- reference_composite_
: BALL::FragmentDistanceCollector
- reference_method
: BALL::ShiftReferenceElement
- REFERENCE_METHOD
: BALL::NMRStarFile
- reference_options_
: BALL::NMRStarFile
- REFERENCE_TEMPERATURE
: BALL::MolecularDynamics::Option
, BALL::MolecularDynamics::Default
- reference_temperature_
: BALL::MolecularDynamics
- reference_type
: BALL::ShiftReferenceElement
- REFERENCE_TYPE
: BALL::NMRStarFile
- ReferenceMethod
: BALL::NMRStarFile
- ReferenceType
: BALL::NMRStarFile
- refine()
: BALL::TriangulatedSphere
- refineGuidePoints_()
: BALL::VIEW::AddBackboneModel
, BALL::VIEW::AddCartoonModel
- refineModelParts_()
: BALL::VIEW::AddBackboneModel
- reflective_color
: BALL::VIEW::Stage::RaytracingMaterial
- reflective_intensity
: BALL::VIEW::Stage::RaytracingMaterial
- reflectivenessFactorChanged()
: BALL::VIEW::MaterialSettings
- refresh()
: BALL::VIEW::GLOffscreenTarget
, BALL::VIEW::GLRenderWindow
, BALL::VIEW::RenderTarget
, BALL::VIEW::RenderWindow< taPixelDatatype >
- regex_
: BALL::RegularExpression
- register_
: BALL::VIEW::RegisterHelpSystemMessage
- registerAt()
: BALL::LogStreamNotifier
- registerClass()
: BALL::PersistenceManager
- registerComponents_()
: BALL::SLICKEnergy
, BALL::SLICKScore
- registerConnectionObject()
: BALL::VIEW::ConnectionObject
- registerController()
: BALL::VIEW::DatasetControl
- registered_at_
: BALL::LogStreamNotifier
- registered_modules_
: BALL::ShiftModel
- registered_objects_
: BALL::VIEW::PreferencesEntry
- registerForHelpSystem()
: BALL::VIEW::ModularWidget
, BALL::VIEW::DockWidget
, BALL::VIEW::HelpViewer
- registerHandler()
: BALL::PluginManager
- RegisterHelpSystemMessage()
: BALL::VIEW::RegisterHelpSystemMessage
- registerInstance_()
: BALL::Embeddable
- registerKernelClasses_()
: BALL::PersistenceManager
- registerModule()
: BALL::ShiftModel
- registerObject_()
: BALL::VIEW::PreferencesEntry
- registerObjectCreator()
: BALL::VIEW::ServerWidget
- registerPredicate()
: BALL::Expression
- registerShortcut()
: BALL::VIEW::ShortcutRegistry
- registerStandardModules_()
: BALL::ShiftModel
- registerStandardPredicates_()
: BALL::Expression
- registerThis()
: BALL::Embeddable
- registerTransformation()
: BALL::TransformationManager
, BALL::File
- registerWidget()
: BALL::VIEW::ModularWidget
- registerWidgetForHelpSystem_()
: BALL::VIEW::PreferencesEntry
- registerWidgets_()
: BALL::VIEW::PreferencesEntry
- registry_
: BALL::VIEW::ShortcutTableModel
- RegularData1DWidget()
: BALL::VIEW::RegularData1DWidget
- RegularData2DWidget()
: BALL::VIEW::RegularData2DWidget
- RegularData3DController()
: BALL::VIEW::RegularData3DController
- RegularExpression()
: BALL::RegularExpression
- rehash()
: BALL::HashSet< Key >
- rehash_()
: BALL::HashSet< Key >
- ReissCavFreeEnergyProcessor()
: BALL::ReissCavFreeEnergyProcessor
- reject()
: BALL::VIEW::EditSingleShortcut
, BALL::VIEW::GeometricFitDialog
, BALL::VIEW::MMFF94ConfigurationDialog
, BALL::VIEW::RaytraceableContourSurfaceDialog
, BALL::VIEW::AmberConfigurationDialog
, BALL::VIEW::AssignBondOrderConfigurationDialog
, BALL::VIEW::CharmmConfigurationDialog
- relative_
: BALL::VIEW::LightSource
- RELEASE_DATE_AND_TIME
: BALL::VersionInfo
- RELEASE_WHAT_STRING
: BALL::VersionInfo
- releaseBuffer()
: BALL::VIEW::RenderTarget
, BALL::VIEW::RenderWindow< taPixelDatatype >
- RelHydrophobicVdWSurface()
: BALL::RelHydrophobicVdWSurface
- RelNegativePartialCharge()
: BALL::RelNegativePartialCharge
- RelNegativePolarVdWSurface()
: BALL::RelNegativePolarVdWSurface
- RelNegativeVdWSurface()
: BALL::RelNegativeVdWSurface
- RelNumberOfRotatableBonds()
: BALL::RelNumberOfRotatableBonds
- RelNumberOfRotatableSingleBonds()
: BALL::RelNumberOfRotatableSingleBonds
- RelPolarVdWSurface()
: BALL::RelPolarVdWSurface
- RelPositivePartialCharge()
: BALL::RelPositivePartialCharge
- RelPositivePolarVdWSurface()
: BALL::RelPositivePolarVdWSurface
- RelPositiveVdWSurface()
: BALL::RelPositiveVdWSurface
- remark_number
: BALL::PDB::RecordREMARK
- remark_records
: BALL::PDB::BookKeeping
- remoteness_indicator_
: BALL::PDBAtom
- REMOTENESS_INDICATOR__alpha
: BALL::PDBAtom
- REMOTENESS_INDICATOR__ALPHA
: BALL::PDBAtom
- REMOTENESS_INDICATOR__BETA
: BALL::PDBAtom
- REMOTENESS_INDICATOR__beta
: BALL::PDBAtom
- REMOTENESS_INDICATOR__DELTA
: BALL::PDBAtom
- REMOTENESS_INDICATOR__delta
: BALL::PDBAtom
- REMOTENESS_INDICATOR__EPSILON
: BALL::PDBAtom
- REMOTENESS_INDICATOR__epsilon
: BALL::PDBAtom
- REMOTENESS_INDICATOR__eta
: BALL::PDBAtom
- REMOTENESS_INDICATOR__ETA
: BALL::PDBAtom
- REMOTENESS_INDICATOR__gamma
: BALL::PDBAtom
- REMOTENESS_INDICATOR__GAMMA
: BALL::PDBAtom
- REMOTENESS_INDICATOR__UNKNOWN
: BALL::PDBAtom
- REMOTENESS_INDICATOR__ZETA
: BALL::PDBAtom
- REMOTENESS_INDICATOR__zeta
: BALL::PDBAtom
- RemotenessIndicator
: BALL::PDBAtom
- remove()
: BALL::GraphVertex< Vertex, Edge, Face >
, BALL::VIEW::RepresentationManager
, BALL::File
, BALL::GraphEdge< Vertex, Edge, Face >
, BALL::TriangulatedSurface
- REMOVE
: BALL::VIEW::DatasetMessage
, BALL::VIEW::RepresentationMessage
- remove()
: BALL::SecondaryStructure
, BALL::LogStream
, BALL::NotificationManager_
, BALL::HashGridBox3< Item >
, BALL::HashGrid3< Item >
, BALL::List< Value >
, BALL::StringHashMap< Value >
, BALL::AtomContainer
, BALL::Chain
, BALL::Molecule
, BALL::Nucleotide
, BALL::Residue
, BALL::SecondaryStructure
, BALL::System
, BALL::GraphFace< Vertex, Edge, Face >
, BALL::GraphVertex< Vertex, Edge, Face >
, BALL::RSFace
, BALL::Triangle
, BALL::TriangulatedSurface
, BALL::Directory
, BALL::File
, BALL::VIEW::CompositeManager
, BALL::VIEW::MainControl
- remove_()
: BALL::VIEW::MainControl
- REMOVE_COORDINATE_SYSTEM
: BALL::VIEW::SceneMessage
- removeAll()
: BALL::HashGridBox3< Item >
- removeChild()
: BALL::Composite
, BALL::ResourceEntry
, BALL::ConnectedToPredicate::CTPNode
- removeClippingPlane()
: BALL::VIEW::RepresentationManager
- removeComponent()
: BALL::ScoringFunction
, BALL::ComposedEnergyProcessor
, BALL::ForceField
, BALL::ScoringFunction
- removeComposite()
: BALL::VIEW::MolecularControl
- REMOVED_COMPOSITE
: BALL::VIEW::CompositeMessage
- removedComposite()
: BALL::VIEW::RepresentationManager
- removeEntry()
: BALL::VIEW::Preferences
- removeFile_()
: BALL::VIEW::DownloadPDBFile
- removeGrid_()
: BALL::VIEW::ModifyRepresentationDialog
- removeGridTextures()
: BALL::VIEW::RenderSetup
- removeHavingProperty()
: BALL::AtomContainer
- removeHotkey()
: BALL::VIEW::PyWidget
- removeInsideTriangles()
: BALL::SASTriangulator
- removeItem_()
: BALL::VIEW::Preferences
, BALL::VIEW::GenericControl
- removeKey()
: BALL::ResourceEntry
, BALL::ResourceFile
- removeLightPressed()
: BALL::VIEW::LightSettings
- removeLightSource()
: BALL::VIEW::Stage
- removeMenuEntry()
: BALL::VIEW::MainControl
- removeModularWidget()
: BALL::VIEW::MainControl
- removeNotHavingProperty()
: BALL::AtomContainer
- removePluginDirectory()
: BALL::PluginManager
, BALL::VIEW::PluginDialog
- removeRecursive_()
: BALL::VIEW::MolecularControl
- removeRepresentation()
: BALL::VIEW::GLRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::RenderSetup
, BALL::VIEW::GeometricControl
, BALL::VIEW::TilingRenderer
- removeSelected()
: BALL::Composite
- removeSelection()
: BALL::VIEW::HotkeyTable
- removeSolvent()
: BALL::PeriodicBoundary
- removeTextureFor_()
: BALL::VIEW::GLRenderer
- removeUnselected()
: BALL::Composite
- rename()
: BALL::Directory
, BALL::File
- renameRepresentation()
: BALL::VIEW::GeometricControl
- renameTo()
: BALL::Directory
, BALL::File
- rend()
: BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >
, BALL::BidirectionalIterator< Container, DataType, Position, Traits >
, BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits >
, BALL::RandomAccessIterator< Container, DataType, Position, Traits >
, BALL::PDBRecords
, BALL::Gradient
, BALL::PDBRecords
- rendBond()
: BALL::Atom
- rendChildComposite()
: BALL::Composite
- rendComposite()
: BALL::Composite
- render()
: BALL::VIEW::GLRenderer
- render_()
: BALL::VIEW::Renderer
, BALL::VIEW::TilingRenderer
- render_mode_
: BALL::VIEW::GLRenderer
- RENDER_MODE_ALWAYS_FRONT
: BALL::VIEW::GLRenderer
- RENDER_MODE_SOLID
: BALL::VIEW::GLRenderer
- RENDER_MODE_TRANSPARENT
: BALL::VIEW::GLRenderer
- RENDER_MODE_UNDEFINED
: BALL::VIEW::GLRenderer
- render_mutex_
: BALL::VIEW::RenderSetup
- render_timer_
: BALL::VIEW::MainControl
- renderBox_()
: BALL::VIEW::Renderer
, BALL::VIEW::GLRenderer
- renderClippingPlane_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::Renderer
- renderDashedBond_()
: BALL::VIEW::AddBallAndStickModel
- renderDisc_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::POVRenderer
, BALL::VIEW::Renderer
- Renderer()
: BALL::VIEW::Renderer
- renderer
: BALL::VIEW::RenderSetup
- rendererChanged()
: BALL::VIEW::MaterialSettings
- renderers_
: BALL::VIEW::Scene
- renderGrid_()
: BALL::VIEW::EditableScene
- renderGridVisualisation_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::Renderer
- rendering_paused_
: BALL::VIEW::RenderSetup
- renderLabel_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::POVRenderer
, BALL::VIEW::Renderer
- renderLine_()
: BALL::VIEW::POVRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::STLRenderer
, BALL::VIEW::VRMLRenderer
, BALL::VIEW::GLRenderer
- renderMesh_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::POVRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::VRMLRenderer
, BALL::VIEW::STLRenderer
- RenderMode
: BALL::VIEW::GLRenderer
- renderMultiLine_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::POVRenderer
- renderMultipleBond_()
: BALL::VIEW::AddBallAndStickModel
- renderNucleotideOutline_()
: BALL::VIEW::AddCartoonModel
- renderOneRepresentation()
: BALL::VIEW::Renderer
, BALL::VIEW::TilingRenderer
, BALL::VIEW::POVRenderer
- renderPoint_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::POVRenderer
, BALL::VIEW::Renderer
- renderQuadMesh_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::Renderer
- renderRepresentation_()
: BALL::VIEW::GLRenderer
- renderRepresentations_()
: BALL::VIEW::GLRenderer
- renderRuler()
: BALL::VIEW::GLRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::TilingRenderer
- RenderSetup
: BALL::VIEW::Scene
, BALL::VIEW::RenderSetup
- renderSimpleBox_()
: BALL::VIEW::Renderer
, BALL::VIEW::GLRenderer
- renderSphere_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::POVRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::STLRenderer
, BALL::VIEW::VRMLRenderer
- renderStandardBond_()
: BALL::VIEW::AddBallAndStickModel
- renderText()
: BALL::VIEW::GLRenderWindow
- renderToBuffer()
: BALL::VIEW::BufferedRenderer
, BALL::VIEW::GLRenderer
, BALL::VIEW::TilingRenderer
, BALL::VIEW::RenderSetup
- renderToBuffer_()
: BALL::VIEW::RenderSetup
- renderToBufferImpl()
: BALL::VIEW::BufferedRenderer
- renderTube_()
: BALL::VIEW::POVRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::STLRenderer
, BALL::VIEW::VRMLRenderer
, BALL::VIEW::GLRenderer
- renderTwoColoredLine_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::POVRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::VRMLRenderer
, BALL::VIEW::STLRenderer
- renderTwoColoredTube_()
: BALL::VIEW::GLRenderer
, BALL::VIEW::POVRenderer
, BALL::VIEW::STLRenderer
, BALL::VIEW::VRMLRenderer
, BALL::VIEW::Renderer
- RenderWindow()
: BALL::VIEW::RenderWindow< taPixelDatatype >
- reopen()
: BALL::File
- rep_
: BALL::VIEW::DisplayProperties
, BALL::VIEW::ModifyRepresentationDialog
, BALL::VIEW::UpdateRepresentationThread
- rep_label_
: BALL::VIEW::MainControl
- rep_label_delta_
: BALL::VIEW::MainControl
- rep_label_nr_
: BALL::VIEW::MainControl
- rep_to_buffers_
: BALL::VIEW::GLRenderer
- replace()
: BALL::Composite
- replacing_entry_code
: BALL::PDB::RecordOBSLTE
- Representation()
: BALL::VIEW::Representation
, BALL::VIEW::RepresentationManager
, BALL::VIEW::Representation
- representation_
: BALL::VIEW::RepresentationMessage
, BALL::RadialDistributionFunction
- representation_to_item_
: BALL::VIEW::GeometricControl
- RepresentationManager
: BALL::VIEW::Representation
, BALL::VIEW::MainControl
, BALL::VIEW::RepresentationManager
- RepresentationMessage()
: BALL::VIEW::RepresentationMessage
- RepresentationMessageType
: BALL::VIEW::RepresentationMessage
- representations_
: BALL::VIEW::RepresentationManager
, BALL::VIEW::POVRenderer
- RepresentationsConstIterator
: BALL::VIEW::RepresentationManager
- RepresentationSet
: BALL::VIEW::RepresentationManager
- RepresentationsIterator
: BALL::VIEW::RepresentationManager
- reps
: BALL::VIEW::ExportGeometryDialog
- reps_
: BALL::VIEW::ClippingPlane
- res
: BALL::HBondProcessor::ResidueData
- rescale()
: BALL::TRegularData3D< ValueType >
, BALL::TRegularData1D< ValueType >
, BALL::TRegularData2D< ValueType >
- reset()
: BALL::VIEW::GeometricFitDialog
, BALL::VIEW::EditSingleShortcut
, BALL::Timer
, BALL::Mainframe
, BALL::VIEW::DockDialog
, BALL::Path
- resetBondOrders()
: BALL::AssignBondOrderProcessor
- resetCamera_()
: BALL::VIEW::Scene
- resetCounter()
: BALL::TContour< T >
, BALL::TContourLine< T >
- resetOptions()
: BALL::VIEW::CharmmConfigurationDialog
, BALL::VIEW::MMFF94ConfigurationDialog
, BALL::VIEW::AmberConfigurationDialog
, BALL::VIEW::AssignBondOrderConfigurationDialog
- resetPositions()
: BALL::AtomVector
- resetPredicate()
: BALL::ResidueIteratorTraits
, BALL::NucleicAcidIteratorTraits
, BALL::AtomContainerIteratorTraits
, BALL::ChainIteratorTraits
, BALL::NucleotideIteratorTraits
, BALL::ProteinIteratorTraits
, BALL::SecondaryStructureIteratorTraits
, BALL::FragmentIteratorTraits
, BALL::MoleculeIteratorTraits
, BALL::AtomIteratorTraits
, BALL::PDBAtomIteratorTraits
- resetPressed()
: BALL::VIEW::DockDialog
, BALL::VIEW::FDPBDialog
- resetRepresentationsForRenderer_()
: BALL::VIEW::Scene
- resetScoring()
: BALL::ConformationSet
- resetTracking()
: BALL::VIEW::Scene
- Residue()
: BALL::Residue
- residue
: BALL::PDB::RecordHET
, BALL::PDB::RecordLINK::LinkPartner
, BALL::PDB::RecordMODRES
, BALL::PDB::RecordSLTBRG::PartnerAtom
, BALL::PDB::Structure::AtomEntry
, BALL::PDB::RecordHYDBND::HydrogenPartnerAtom
, BALL::PDB::RecordSEQADV
, BALL::PDB::RecordATOM
, BALL::PDB::RecordSITE
- Residue()
: BALL::Residue
, BALL::PDB::Residue
- residue
: BALL::PDB::RecordANISOU
- Residue()
: BALL::Residue
- residue
: BALL::PDB::RecordCISPEP
, BALL::PDB::RecordHETATM
, BALL::PDB::RecordHYDBND::HydrogenAtom
, BALL::PDB::RecordSIGATM
, BALL::PDB::RecordSIGUIJ
, BALL::PDB::RecordTER
- residue_data_
: BALL::HBondProcessor
- residue_id
: BALL::PDB::AdditionalAtomInfo
- residue_in_current_strand
: BALL::PDB::RecordSHEET
- residue_in_previous_strand
: BALL::PDB::RecordSHEET
- residue_insertion_code
: BALL::PDB::AdditionalAtomInfo
- residue_label
: BALL::NMRAtomData
- residue_map_
: BALL::VIEW::ResidueNumberColorProcessor
, BALL::PDBFile
- residue_name
: BALL::PDB::RecordSEQRES
, BALL::PDB::AdditionalAtomInfo
, BALL::ResidueTorsions::Data
- residue_name_
: BALL::PDBFile
- residue_seq_code
: BALL::NMRAtomData
- residue_sequence_number_
: BALL::PDBFile
- residue_table_
: BALL::VIEW::ColoringSettingsDialog
- residue_torsions_
: BALL::CharmmTorsion
- ResidueChecker()
: BALL::ResidueChecker
- ResidueIteratorTraits()
: BALL::ResidueIteratorTraits
- ResidueMap
: BALL::PDBFile
- ResidueNameColorProcessor()
: BALL::VIEW::ResidueNameColorProcessor
- ResidueNumberColorProcessor()
: BALL::VIEW::ResidueNumberColorProcessor
- ResidueQuadruple
: BALL::PDBFile
- ResidueRotamerSet()
: BALL::ResidueRotamerSet
- residues
: BALL::VIEW::AddBackboneModel::ModelPart
- residues_to_be_rendered_
: BALL::VIEW::AddBackboneModel
- residues_with_rings_
: BALL::JohnsonBoveyShiftProcessor
- residuesAreConnected_()
: BALL::VIEW::AddBackboneModel
- ResidueTorsions()
: BALL::ResidueTorsions
- ResidueTypeColorProcessor()
: BALL::VIEW::ResidueTypeColorProcessor
- resize()
: BALL::TRegularData3D< ValueType >
, BALL::AtomVector
, BALL::VIEW::MainControl
, BALL::TRegularData1D< ValueType >
, BALL::VIEW::GLOffscreenTarget
, BALL::TRegularData2D< ValueType >
, BALL::PDBRecords
, BALL::VIEW::GLRenderWindow
, BALL::VIEW::RenderSetup
, BALL::VIEW::FrameBufferFormat
, BALL::VIEW::RenderWindow< taPixelDatatype >
, BALL::VIEW::RenderTarget
- resize_()
: BALL::NotificationManager_
, BALL::SmartsMatcher::RecStructPool_
- resize_to_parent_
: BALL::VIEW::SDWidget
- resized()
: BALL::VIEW::FrameBufferFormat
- resizeEvent()
: BALL::VIEW::DockableRegularData2DWidget
, BALL::VIEW::Scene
, BALL::VIEW::DockableRegularData1DWidget
- resizeGrid()
: BALL::VIEW::RegularData3DController
- resizeNormals()
: BALL::TSurface< T >
- resizeTriangles()
: BALL::TSurface< T >
- resizeVertices()
: BALL::TSurface< T >
- Resolution()
: BALL::VIEW::Resolution
- ResourceEntry()
: BALL::ResourceEntry
- ResourceFile()
: BALL::ResourceFile
- restart_
: BALL::TCPServer
- restart_frequency_
: BALL::ConjugateGradientMinimizer
- restoreDefaultValues()
: BALL::VIEW::PreferencesEntry
, BALL::VIEW::LightSettings
- restoreItem_()
: BALL::VIEW::AtomOverview
- restoreRepresentations()
: BALL::VIEW::RepresentationManager
- restoreValues()
: BALL::VIEW::PreferencesEntry
, BALL::VIEW::LightSettings
- restoreValues_()
: BALL::VIEW::PreferencesEntry
- restoreViewPoint()
: BALL::VIEW::Scene
- restoreWindows()
: BALL::VIEW::MainControl
- Result
: BALL::RMSDMinimizer
, BALL::Processor
- result_
: BALL::RombergIntegrator< Function, DataType >
- result_type
: BALL::BinaryFunctor< FirstArgumentType, SecondArgumentType, ResultType >
, BALL::UnaryFunctor< ArgumentType, ResultType >
- results
: BALL::FDPB
- results_
: BALL::VIEW::PyWidget
- retrieveHistoryLine_()
: BALL::VIEW::PyWidget
- returnPressed()
: BALL::VIEW::PyWidget
- reverse()
: BALL::String
- reverse_iterator
: BALL::PDBRecords
- ReverseIterator
: BALL::Gradient
, BALL::PDBRecords
- revert()
: BALL::GraphEdge< Vertex, Edge, Face >
- rewind()
: BALL::LineBasedFile
- Rf
: BALL::Element
- RGB_24
: BALL::VIEW::PixelFormat
- RGB_32
: BALL::VIEW::PixelFormat
- RGB_3_2_2
: BALL::VIEW::PixelFormat
- RGBA_32
: BALL::VIEW::PixelFormat
- RGBF_96
: BALL::VIEW::PixelFormat
- Rh
: BALL::Element
- RHENIUM
: BALL::Element
- rho_
: BALL::StrangLBFGSMinimizer
- RHO_0
: BALL::GeneralizedBornModel::Default
, BALL::GeneralizedBornModel::Option
- rho_0_
: BALL::GeneralizedBornModel::GBParameters
, BALL::GeneralizedBornModel
- RHODIUM
: BALL::Element
- RIBBON
: BALL::VIEW::AddBackboneModel
- ribbon_height_
: BALL::VIEW::AddBackboneModel
- ribbon_mode_
: BALL::VIEW::AddBackboneModel
- ribbon_radius_
: BALL::VIEW::AddCartoonModel
- ribbon_width_
: BALL::VIEW::AddCartoonModel
, BALL::VIEW::AddBackboneModel
- ribbonModeEnabled()
: BALL::VIEW::AddBackboneModel
- ribbonsEnabled()
: BALL::VIEW::AddCartoonModel
- right()
: BALL::String
- right_
: BALL::VIEW::GLRenderer
- RIGHT_EYE
: BALL::VIEW::RenderSetup
- RIGHT_EYE_WINDOW
: BALL::VIEW::Scene
- right_vector_
: BALL::VIEW::Camera
, BALL::TBox3< T >
- rij
: BALL::MMFF94NonBonded::NonBondedPairData
- rij_
: BALL::MMFF94VDWParameters
- rij_7
: BALL::MMFF94NonBonded::NonBondedPairData
- rij_7_
: BALL::MMFF94VDWParameters
- ring
: BALL::RingAnalyser::RingInfo
- ring_atoms_
: BALL::CHPI::AromaticRing
, BALL::AddHydrogenProcessor
, BALL::RingFinder
, BALL::VIEW::AtomBondModelBaseProcessor
- ring_bonds_
: BALL::VIEW::AddBallAndStickModel
- RING_CONNECTED
: BALL::SmartsParser::SPAtom
- ring_connections_
: BALL::SmartsParser
- ring_proc_
: BALL::SMARTSPredicate
- RingAnalyser()
: BALL::RingAnalyser
- RingClusterer()
: BALL::RingClusterer
- RingFinder()
: BALL::RingFinder
- RingInfo
: BALL::RSConstructor
- RingPerceptionProcessor()
: BALL::RingPerceptionProcessor
- rings_
: BALL::RingPerceptionProcessor
, BALL::VIEW::AtomBondModelBaseProcessor
, BALL::AtomTyper
, BALL::JohnsonBoveyShiftProcessor
, BALL::MMFF94
, BALL::Kekuliser
- RingType
: BALL::RingAnalyser
- rms
: BALL::Gradient
- RMS_CRITERION
: BALL::FDPB::Default
, BALL::FDPB::Option
- rmsd_
: BALL::StructureMapper
- Rn
: BALL::Element
- RombergIntegrator()
: BALL::RombergIntegrator< Function, DataType >
- root
: BALL::GAFFCESParser
- root_
: BALL::ResourceFile
, BALL::VIEW::AssignBondOrderResultsDialog
, BALL::SmartsParser
- root_atom
: BALL::MOL2File::SubstructureStruct
- root_predicate
: BALL::GAFFCESParser
- ROT_ALGORITHM
: BALL::RotationalEntropyLoss::Default
, BALL::RotationalEntropyLoss::Option
- ROT_BIND_OFFSET
: BALL::RotationalEntropyLoss::Option
, BALL::RotationalEntropyLoss::Default
- ROT_GRID_SPACING
: BALL::RotationalEntropyLoss::Option
, BALL::RotationalEntropyLoss::Default
- ROT_METHOD
: BALL::RotationalEntropyLoss::Default
, BALL::RotationalEntropyLoss::Option
- Rotamer()
: BALL::Rotamer
- RotamerLibrary()
: BALL::RotamerLibrary
- rotamers_
: BALL::ResidueRotamerSet
- rotatable_bonds_
: BALL::RotationalEntropyLoss
- rotate()
: BALL::VIEW::Camera
, BALL::TMatrix4x4< T >
, BALL::VIEW::Scene
, BALL::TMatrix4x4< T >
, BALL::VIEW::Camera
, BALL::TMatrix4x4< T >
- ROTATE__MODE
: BALL::VIEW::Scene
- ROTATE_ACTION
: BALL::VIEW::Scene
- rotate_action_
: BALL::VIEW::Scene
- ROTATE_CLOCKWISE_ACTION
: BALL::VIEW::Scene
- rotateBases()
: BALL::DNAMutator
- rotateClockwise()
: BALL::VIEW::Scene
- rotateComposites()
: BALL::VIEW::Scene
- ROTATED
: BALL::SDGenerator
- rotateMode_()
: BALL::VIEW::Scene
- rotateSameBases()
: BALL::DNAMutator
- rotateSystem_()
: BALL::VIEW::Scene
- rotateSystemClockwise_()
: BALL::VIEW::Scene
- rotateVector3Angle_()
: BALL::VIEW::GLRenderer
- rotateX()
: BALL::TMatrix4x4< T >
- rotateY()
: BALL::TMatrix4x4< T >
- rotateZ()
: BALL::TMatrix4x4< T >
- rotation_
: BALL::VIEW::TransformationEvent6D
, BALL::VIEW::POVRenderer
, BALL::VIEW::VRMLRenderer
, BALL::VIEW::STLRenderer
- RotationalEntropyLoss()
: BALL::RotationalEntropyLoss
- RotationAngles_()
: BALL::GeometricFit::RotationAngles_
- row_
: BALL::VIEW::AtomOverview::ApplyProcessor
- rowCount()
: BALL::VIEW::ShortcutTableModel
, BALL::VIEW::PluginModel
- rowSelected()
: BALL::VIEW::PythonSettings
- rs_
: BALL::MMFF94VDWParameters
, BALL::RSComputer
- RSComputer()
: BALL::RSComputer
, BALL::RSVertex
, BALL::RSFace
, BALL::ReducedSurface
, BALL::RSComputer
, BALL::RSEdge
- RSConstructor()
: BALL::RSConstructor
- RSEdge()
: BALL::RSEdge
, BALL::RSFace
, BALL::RSEdge
, BALL::RSVertex
- rsedge_
: BALL::SESFace
, BALL::SESEdge
- RSFace
: BALL::RSEdge
, BALL::RSVertex
, BALL::RSFace
- rsface_
: BALL::SESFace
- RSVertex
: BALL::RSFace
, BALL::RSVertex
, BALL::RSEdge
, BALL::RSVertex
- rsvertex_
: BALL::SESFace
- rt_contour_surface_dialog_
: BALL::VIEW::RaytraceableGridController
- rt_material_
: BALL::VIEW::Stage
- Ru
: BALL::Element
- RUBIDIUM
: BALL::Element
- rule_map_
: BALL::RuleEvaluator
- rule_times
: BALL::AtomTyper
- rule_types_
: BALL::MMFF94ChargeProcessor
- RuleEvaluator()
: BALL::RuleEvaluator
- RuleList
: BALL::RuleEvaluator
- RuleMap
: BALL::RuleEvaluator
- RuleProcessor()
: BALL::RuleProcessor
- rules_
: BALL::AtomTyper
- run()
: BALL::RSComputer
, BALL::TCPServerThread
, BALL::VIEW::ServerWidget::BALLViewServer
, BALL::VIEW::DockingThread
, BALL::VIEW::EnergyMinimizerThread
, BALL::VIEW::UpdateRepresentationThread
, BALL::VIEW::BALLThread
, BALL::VIEW::CalculateFDPBThread
, BALL::SESComputer
, BALL::VIEW::FakeDriver
, BALL::SESTriangulator
, BALL::VIEW::RunPythonThread
, BALL::SESSingularityCleaner
, BALL::PyInterpreter
, BALL::SASTriangulator
, BALL::VIEW::RenderSetup
, BALL::VIEW::AnimationThread
, BALL::VIEW::MDSimulationThread
, BALL::VIEW::FetchHTMLThread
, BALL::VIEW::TestFramework::MyEventThread
- run_test
: BALL::VIEW::TestFramework
- runBondOrderAssignment()
: BALL::VIEW::MolecularStructure
- runCommand_()
: BALL::VIEW::PyWidget
- runCurrentScript()
: BALL::VIEW::PyWidget
- runDocking()
: BALL::VIEW::DockingController
- runFile()
: BALL::PyInterpreter
- RunGAMESSDialog()
: BALL::VIEW::RunGAMESSDialog
- runMinimization()
: BALL::VIEW::MolecularStructure
- running_
: BALL::VIEW::PyWidget
- running_plugins_
: BALL::PluginHandler
- RunPythonThread()
: BALL::VIEW::RunPythonThread
- runScoring_()
: BALL::VIEW::DockingController
- runString()
: BALL::VIEW::PyWidget
- runTest()
: BALL::VIEW::TestFramework
- runtime_
: BALL::VIEW::TestFramework
- RUTHENIUM
: BALL::Element
- RUTHERFORDIUM
: BALL::Element