- d -
- dashedBondsEnabled()
: BALL::VIEW::AddBallAndStickModel
- data()
: BALL::VIEW::PluginModel
- Data()
: BALL::ResidueTorsions::Data
- data()
: BALL::VIEW::ShortcutTableModel
- DataItem()
: BALL::HashGridBox3< Item >::DataItem
- DataIteratorTraits()
: BALL::HashGridBox3< Item >::DataIteratorTraits
- Dataset()
: BALL::VIEW::Dataset
- DatasetControl()
: BALL::VIEW::DatasetControl
- DatasetController()
: BALL::VIEW::DatasetController
- DatasetMessage()
: BALL::VIEW::DatasetMessage
- DCDFile()
: BALL::DCDFile
- deactivate()
: BALL::BALLPlugin
, BALL::TCPServer
, BALL::TCPServerThread
, BALL::VIEW::ServerWidget
- decodeBase64()
: BALL::String
- defaultAssign_()
: BALL::Enumerator< Container, SiteIterator, Variant >
- defaultsPressed()
: BALL::VIEW::LightSettings
- deleteAtom_()
: BALL::VIEW::EditableScene
- deleteBond_()
: BALL::VIEW::EditableScene
- deleteBuckets_()
: BALL::HashSet< Key >
- deleteChildrenList_()
: BALL::Composite
- deleteClicked()
: BALL::VIEW::MainControl
- deleteColumn_()
: BALL::VIEW::DockResultDialog
- deleteCurrentItems()
: BALL::VIEW::DatasetControl
, BALL::VIEW::GenericControl
, BALL::VIEW::GeometricControl
, BALL::VIEW::MolecularControl
- deleteDataset()
: BALL::VIEW::DatasetController
- deleteDataset_()
: BALL::VIEW::DatasetController
, BALL::VIEW::RegularData3DController
, BALL::VIEW::TrajectoryController
, BALL::VIEW::DockResultController
, BALL::VIEW::VectorGridController
, BALL::VIEW::RaytraceableGridController
- deleteDatasets()
: BALL::VIEW::DatasetController
- deleteEdge()
: BALL::TMolecularGraph< Node, Edge >
- deleteEdge_()
: BALL::NodeItem< Node, Edge >
- deleteEntry()
: BALL::ResourceEntry
- deleteEntryArray()
: BALL::ResourceEntry
- deleteIsolatedEdges()
: BALL::TriangulatedSurface
- deleteIsolatedPoints()
: BALL::TriangulatedSurface
- deleteLine()
: BALL::INIFile
- deleteNode()
: BALL::TMolecularGraph< Node, Edge >
- deleteNode_()
: BALL::HashSet< Key >
- deleteOverestimatedBonds_()
: BALL::BuildBondsProcessor
- deleteRotamer()
: BALL::ResidueRotamerSet
- deleteRotamers()
: BALL::ResidueRotamerSet
- deleteScoring()
: BALL::DockResult
- deleteSection()
: BALL::INIFile
- deleteSimilarFaces()
: BALL::ReducedSurface
- deleteSmallSingularToricFace()
: BALL::SolventExcludedSurface
- deleteSmallToricFace()
: BALL::SolventExcludedSurface
- deleteTexture()
: BALL::VIEW::GLRenderWindow
- deleteVariants()
: BALL::Enumerator< Container, SiteIterator, Variant >
- DemoTutorialDialog()
: BALL::VIEW::DemoTutorialDialog
- Density()
: BALL::Density
- Descriptor()
: BALL::Descriptor
- deselect()
: BALL::Composite
, BALL::Selectable
, BALL::VIEW::MolecularControl
- deselect_()
: BALL::Composite
, BALL::VIEW::EditableScene
- deselectCompositeRecursive()
: BALL::VIEW::MainControl
- DeselectControlsMessage()
: BALL::VIEW::DeselectControlsMessage
- deselectOtherControls_()
: BALL::VIEW::GenericControl
- destroy()
: BALL::Composite
, BALL::NotificationSource_
, BALL::NotificationManager_
, BALL::PropertyManager
, BALL::HashGridBox3< Item >
, BALL::HashGrid3< Item >
, BALL::HashSet< Key >
, BALL::List< Value >
, BALL::RegularExpression
, BALL::String
, BALL::Substring
, BALL::StringHashMap< Value >
, BALL::ResourceEntry
, BALL::ResourceFile
, BALL::Atom
, BALL::AtomContainer
, BALL::Bond
, BALL::NucleicAcid
, BALL::Nucleotide
, BALL::PDBAtom
, BALL::Protein
, BALL::Residue
, BALL::SecondaryStructure
, BALL::ConnectedToPredicate::CTPNode
, BALL::TFFT1D< ComplexTraits >
, BALL::TFFT2D< ComplexTraits >
, BALL::TFFT3D< ComplexTraits >
, BALL::RuleProcessor
, BALL::FDPB
, BALL::FragmentDB
, BALL::SmartsMatcher::RecStructPool_
, BALL::Directory
, BALL::VIEW::ConnectionObject
, BALL::VIEW::ModularWidget
- destroy_()
: BALL::GeometricFit
- destroyBond()
: BALL::Atom
- destroyBonds()
: BALL::Atom
, BALL::AtomContainer
- destroyGrids()
: BALL::FDPB
- desynchronize_()
: BALL::Directory
- determineMethodOfAtomPairGeneration()
: BALL::MMFF94NonBonded
, BALL::AmberNonBonded
, BALL::CharmmNonBonded
- determineSelection_()
: BALL::Composite
- DeviceEvent()
: BALL::VIEW::DeviceEvent
- dfs()
: BALL::RingFinder
- DFSBCC_()
: BALL::RingPerceptionProcessor
- difference()
: BALL::Spectrum< DataT, PeakT, PositionT >
- Directory()
: BALL::Directory
- directorySelectionChanged()
: BALL::VIEW::PluginDialog
- disable()
: BALL::NotificationSource_
, BALL::NotificationManager_
, BALL::PeriodicBoundary
, BALL::ResidueChecker
- disableAtoms()
: BALL::SDFile
- disableLoggingToFile()
: BALL::VIEW::MainControl
- disableOutput()
: BALL::LogStream
- disableSelection()
: BALL::ForceField
, BALL::ResidueChecker
- disableTransformation()
: BALL::File
- disableVelocityStorage()
: BALL::DCDFile
- Disc()
: BALL::VIEW::Disc
- DisplayListRedeclaration()
: BALL::VIEW::GLDisplayList::DisplayListRedeclaration
- DisplayProperties()
: BALL::VIEW::DisplayProperties
- Division()
: BALL::Division< First, Second, DataType >
- DivisionByZero()
: BALL::Exception::DivisionByZero
- DNAMutator()
: BALL::DNAMutator
- DockableRegularData1DWidget()
: BALL::VIEW::DockableRegularData1DWidget
- DockableRegularData2DWidget()
: BALL::VIEW::DockableRegularData2DWidget
- DockDialog()
: BALL::VIEW::DockDialog
- DockingController()
: BALL::VIEW::DockingController
- DockingFinishedMessage()
: BALL::VIEW::DockingFinishedMessage
- DockingThread()
: BALL::VIEW::DockingThread
- DockProgressDialog()
: BALL::VIEW::DockProgressDialog
- DockResult()
: BALL::DockResult
- DockResultController()
: BALL::VIEW::DockResultController
- DockResultDialog()
: BALL::VIEW::DockResultDialog
- DockWidget()
: BALL::VIEW::DockWidget
- doFFT()
: BALL::TFFT1D< ComplexTraits >
, BALL::TFFT2D< ComplexTraits >
, BALL::TFFT3D< ComplexTraits >
- doiFFT()
: BALL::TFFT2D< ComplexTraits >
, BALL::TFFT1D< ComplexTraits >
, BALL::TFFT3D< ComplexTraits >
- doMatch_()
: BALL::FragmentDB::NormalizeNamesProcessor
- doPreTranslation_()
: BALL::GeometricFit
- downloadEnded_()
: BALL::VIEW::DownloadPDBFile
- DownloadPDBFile()
: BALL::VIEW::DownloadPDBFile
- downloadStarted_()
: BALL::VIEW::DownloadPDBFile
- downwardClicked()
: BALL::VIEW::DockResultDialog
- dragEnterEvent()
: BALL::VIEW::DockWidget
, BALL::VIEW::Scene
- DragLogView()
: BALL::VIEW::DragLogView
- draw()
: BALL::VIEW::GLDisplayList
, BALL::VIEW::MeshBuffer
- drawBuffered()
: BALL::VIEW::GLRenderer
- drawDNAAsLadderModel()
: BALL::VIEW::AddCartoonModel
- drawRiboseAtoms_()
: BALL::VIEW::AddCartoonModel
- drawShape()
: BALL::VIEW::CanvasWidget::PixmapItem
- drawStrand_()
: BALL::VIEW::AddCartoonModel
- dropEvent()
: BALL::VIEW::DockWidget
, BALL::VIEW::Scene
- DSN6File()
: BALL::DSN6File
- dummy()
: BALL::Visitor< Host >
- dummySlot()
: BALL::VIEW::Scene
- dump()
: BALL::Object
, BALL::VIEW::MultiColorExtension
, BALL::VIEW::ColorExtension2
, BALL::VIEW::AddSurfaceModel
, BALL::HashGrid3< Item >
, BALL::VIEW::ModelProcessor
, BALL::SmartsMatcher::RecStruct_
, BALL::Selectable
, BALL::VIEW::ColorUnit
, BALL::VIEW::AddBallAndStickModel
, BALL::Substring
, BALL::Options
, BALL::VIEW::Mesh
, BALL::VIEW::Camera
, BALL::Client
, BALL::ResourceFile
, BALL::Chain
, BALL::VIEW::AddVanDerWaalsModel
, BALL::VIEW::Vertex
, BALL::AtomContainer
, BALL::VIEW::ServerWidget
, BALL::TAngle< T >
, BALL::PiecewisePolynomial
, BALL::ExpressionTree
, BALL::Protein
, BALL::TVector4< T >
, BALL::VIEW::GeometricObject
, BALL::Nucleotide
, BALL::VIEW::Box
, BALL::NucleicAcid
, BALL::Atom
, BALL::TSphere3< T >
, BALL::Residue
, BALL::VIEW::GLDisplayList
, BALL::PDBAtom
, BALL::TBox3< T >
, BALL::VIEW::Dataset
, BALL::Atom::BondIteratorTraits
, BALL::Fragment
, BALL::PiecewiseFunction
, BALL::ExpressionParser::SyntaxTree
, BALL::VIEW::Label
, BALL::Bond
, BALL::TSimpleBox3< T >
, BALL::VIEW::LightSource
, BALL::ConnectedToPredicate
, BALL::RuleEvaluator
, BALL::VIEW::TwoColoredTube
, BALL::VIEW::TwoColoredLine
, BALL::VIEW::ColorRGBA
, BALL::VIEW::Stage
, BALL::CHPI::AromaticRing
, BALL::VIEW::GLRenderer
, BALL::VIEW::ColorHSV
, BALL::LogStreamBuf
, BALL::Kekuliser
, BALL::NotificationManager_
, BALL::PropertyManager
, BALL::HashGridBox3< Item >
, BALL::RadialDistributionFunction
, BALL::VIEW::AddBackboneModel
, BALL::Pair6_12RDFIntegrator
, BALL::TQuaternion< T >
, BALL::ResourceEntry
, BALL::TVector3< T >
, BALL::TVector2< T >
, BALL::VIEW::PreferencesEntry
, BALL::VIEW::MultiLine
, BALL::VIEW::Representation
, BALL::TLine3< T >
, BALL::VIEW::ConnectionObject
, BALL::SecondaryStructure
, BALL::VIEW::ColorUnitHue
, BALL::VIEW::MainControl
, BALL::VIEW::PyWidget
, BALL::VIEW::Disc
, BALL::VIEW::ColorMap
, BALL::VIEW::CompositeManager
, BALL::VIEW::Vertex2
, BALL::Molecule
, BALL::TCPTransfer
, BALL::VIEW::SimpleBox
, BALL::String
, BALL::Composite
, BALL::Embeddable
, BALL::VIEW::Sphere
, BALL::VIEW::Tube
, BALL::HashSet< Key >
, BALL::VIEW::Scene
, BALL::VIEW::RepresentationManager
, BALL::VIEW::Point
, BALL::VIEW::Line
, BALL::TMatrix4x4< T >
, BALL::TCircle3< T >
, BALL::ConnectedToPredicate
, BALL::VIEW::ModularWidget
, BALL::CHPI::CHGroup
, BALL::PairExpRDFIntegrator
, BALL::VIEW::ColorProcessor
, BALL::Timer
, BALL::TPlane3< T >
, BALL::VIEW::AddLineModel
, BALL::RegularExpression
, BALL::VIEW::AtomBondModelBaseProcessor
, BALL::RuleProcessor
- dumpTree()
: BALL::SmartsParser
- dumpTreeRecursive_()
: BALL::SmartsParser
- duplicate()
: BALL::VIEW::GeometricControl
- duplicateKeyCheckEnabled()
: BALL::INIFile