Here is a list of all class members with links to the classes they belong to:
- CSalzbergWordKernel()
: CSalzbergWordKernel
- CSGObject()
: CSGObject
- CShortFeatures()
: CShortFeatures
- CShortRealFeatures()
: CShortRealFeatures
- CSigmoidKernel()
: CSigmoidKernel
- CSignal()
: CSignal
- CSimpleDistance()
: CSimpleDistance< ST >
- CSimpleFeatures()
: CSimpleFeatures< ST >
- CSimpleFile()
: CSimpleFile< T >
- CSimpleKernel()
: CSimpleKernel< ST >
- CSimpleLocalityImprovedStringKernel()
: CSimpleLocalityImprovedStringKernel
- CSimplePreProc()
: CSimplePreProc< ST >
- CSortUlongString()
: CSortUlongString
- CSortWord()
: CSortWord
- CSortWordString()
: CSortWordString
- CSparseDistance()
: CSparseDistance< ST >
- CSparseEuclidianDistance()
: CSparseEuclidianDistance
- CSparseFeatures()
: CSparseFeatures< ST >
- CSparseGaussianKernel()
: CSparseGaussianKernel
- CSparseKernel()
: CSparseKernel< ST >
- CSparseLinearClassifier()
: CSparseLinearClassifier
- CSparseLinearKernel()
: CSparseLinearKernel
- CSparsePolyKernel()
: CSparsePolyKernel
- CSparsePreProc()
: CSparsePreProc< ST >
- CStringDistance()
: CStringDistance< ST >
- CStringFeatures()
: CStringFeatures< ST >
- CStringKernel()
: CStringKernel< ST >
- CStringPreProc()
: CStringPreProc< ST >
- CSubGradientSVM()
: CSubGradientSVM
- CSVM()
: CSVM
- CSVMLin()
: CSVMLin
- CSVMOcas()
: CSVMOcas
- CSVMSGD()
: CSVMSGD
- S
: POIMTrie
, options
- s
: Delta
- sa
: radix_stack_t< T >
- sanitycheck_weak()
: CPyramidChi2
- save()
: CClassifier
, CByteFeatures
, CSortWord
, CSortWordString
, CCharFeatures
, CKernelPerceptron
, CFeatures
, CIntFeatures
, CKNN
, CLabels
, CRealFeatures
, CSortUlongString
, CShortFeatures
, CLinearClassifier
, CShortRealFeatures
, CSVM
, CStringFeatures< ST >
, CWordFeatures
, CHierarchical
, CKernel
, CSimpleFile< T >
, CKMeans
, CLogPlusOne
, CNormDerivativeLem3
, CDistance
, CNormOne
- save_byte_data()
: CFile
- save_char_data()
: CFile
- save_init()
: CLinearWordKernel
, CLocalAlignmentStringKernel
, CLocalityImprovedStringKernel
, CPolyKernel
, CPolyMatchStringKernel
, CPolyMatchWordKernel
, CPyramidChi2
, CSalzbergWordKernel
, CCanberraMetric
, CSigmoidKernel
, CSimpleLocalityImprovedStringKernel
, CCanberraWordDistance
, CSparseGaussianKernel
, CSparseLinearKernel
, CChebyshewMetric
, CSparsePolyKernel
, CWeightedDegreePositionStringKernel
, CDistance
, CWeightedDegreeStringKernel
, CWordMatchKernel
, CEuclidianDistance
, CGeodesicMetric
, CHammingWordDistance
, CJensenMetric
, CManhattanMetric
, CManhattanWordDistance
, CMinkowskiMetric
, CSparseEuclidianDistance
, CAUCKernel
, CChi2Kernel
, CCombinedKernel
, CCommUlongStringKernel
, CCommWordStringKernel
, CConstKernel
, CCustomKernel
, CDiagKernel
, CDistanceKernel
, CFixedDegreeStringKernel
, CGaussianKernel
, CHistogramWordKernel
, CKernel
, CLinearByteKernel
, CLinearKernel
, CLinearStringKernel
- save_init_data()
: CLogPlusOne
, CNormOne
, CPreProc
, CPruneVarSubMean
, CSortUlongString
, CSortWord
, CSortWordString
- save_int_data()
: CFile
- save_likelihood()
: CHMM
- save_likelihood_bin()
: CHMM
- save_model()
: CHMM
- save_model_bin()
: CHMM
- save_model_derivatives()
: CHMM
- save_model_derivatives_bin()
: CHMM
- save_path()
: CHMM
- save_path_derivatives()
: CHMM
- save_path_derivatives_bin()
: CHMM
- save_real_data()
: CFile
- save_short_data()
: CFile
- save_shortreal_data()
: CFile
- save_word_data()
: CFile
- sCache()
: sCache
- scale
: CEuclidianDistance
, CSparseEuclidianDistance
, CLinearByteKernel
, CLinearKernel
, CLinearStringKernel
, CLinearWordKernel
, CSparseLinearKernel
, CWordMatchKernel
- scale_vector()
: CMath
- scaled_blosum
: CLocalAlignmentStringKernel
- score
: ConsensusEntry
- seed
: CMath
- segments_changed
: CDynProg::segment_loss_struct
- select_feature_vector()
: CStringFeatures< ST >
- select_working_set()
: Solver
- selected_vector
: CStringFeatures< ST >
- seq
: POIMTrie
, DNATrie
- seq_length
: CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
- seqlen
: CDynProg::segment_loss_struct
, CDynProg::svm_values_struct
- sequence_length
: CLinearHMM
- set_a()
: CDynProg
- set_A()
: CHMM
- set_a()
: CHMM
, CFKFeatures
- set_a_id()
: CDynProg
- set_a_trans_matrix()
: CDynProg
- set_alpha()
: CSVM
- set_alphabet()
: CAlphabet
- set_alphas()
: CSVM
- set_array()
: CArray< T >
, CArray2< T >
, CArray3< T >
, CDynamicArray< T >
- set_B()
: CHMM
- set_b()
: CHMM
- set_batch_computation_enabled()
: CKernelMachine
- set_bias()
: CLinearClassifier
, CSparseLinearClassifier
, CSVM
- set_bias_enabled()
: CSubGradientSVM
, CSVM
, CSVMLin
, CSVMOcas
, CSVMSGD
, CWDSVMOcas
- set_bufsize()
: CSVMOcas
, CWDSVMOcas
- set_C()
: CSubGradientSVM
, CSVM
, CSVMLin
, CSVMOcas
, CSVMSGD
, CWDSVMOcas
- set_C_mkl()
: CSVM
- set_cache_size()
: CKernel
- set_combined_kernel_weight()
: CKernel
- set_const_a()
: CModel
- set_const_a_val()
: CModel
- set_const_b()
: CModel
- set_const_b_val()
: CModel
- set_const_p()
: CModel
- set_const_p_val()
: CModel
- set_const_q()
: CModel
- set_const_q_val()
: CModel
- set_defaults()
: CSVM
- set_degree()
: CWDSVMOcas
, CWeightedDegreeStringKernel
, CTrie< Trie >
- set_dirname()
: CIO
- set_disable_sqrt()
: CEuclidianDistance
- set_distance()
: CDistanceMachine
- set_do_calc()
: CPlif
- set_element()
: CArray< T >
, CArray2< T >
, CArray3< T >
, CDynamicArray< T >
- set_entry()
: CCache< T >
- set_epochs()
: CSVMSGD
- set_epsilon()
: CSubGradientSVM
, CSVM
, CSVMLin
, CSVMOcas
, CWDSVMOcas
, CHMM
- set_feature_matrix()
: CFKFeatures
, CSimpleFeatures< ST >
, CTOPFeatures
- set_feature_vector()
: CStringFeatures< ST >
- set_features()
: CLinearClassifier
, CPluginEstimate
, CSparseLinearClassifier
, CWDSVMOcas
, CDistribution
, CStringFeatures< ST >
- set_full_feature_matrix()
: CSparseFeatures< ST >
- set_full_kernel_matrix_from_full()
: CCustomKernel
- set_genestr_len()
: CDynProg
- set_granularity()
: CDynamicArray< T >
- set_handler()
: CSignal
- set_histogram()
: CHistogram
- set_id()
: CPlif
- set_int_label()
: CLabels
- set_int_labels()
: CLabels
- set_is_initialized()
: CKernel
- set_iterations()
: CHMM
- set_k()
: CKNN
, CKMeans
- set_kernel()
: CKernelMachine
- set_label()
: CLabels
- set_labels()
: CClassifier
, CLabels
- set_learn_a()
: CModel
- set_learn_b()
: CModel
- set_learn_p()
: CModel
- set_learn_q()
: CModel
- set_learn_rate()
: CPerceptron
- set_linadd_enabled()
: CKernelMachine
- set_log_transition_probs()
: CLinearHMM
- set_loglevel()
: CIO
- set_max_iter()
: CPerceptron
, CKMeans
- set_max_mismatch()
: CWeightedDegreeStringKernel
- set_max_train_time()
: CClassifier
- set_max_value()
: CPlif
- set_merges()
: CHierarchical
- set_min_value()
: CPlif
- set_mkl_enabled()
: CSVM
- set_mkl_stepsize()
: CWeightedDegreeStringKernel
- set_model_params()
: CPluginEstimate
- set_models()
: CFKFeatures
, CTOPFeatures
- set_name()
: CPlif
, CArray2< T >
, CArray< T >
, CArray3< T >
- set_normalization_const()
: CWDSVMOcas
- set_nu()
: CSVM
- set_num_features()
: CSparseFeatures< ST >
, CSimpleFeatures< ST >
- set_num_states()
: CDynProg
- set_num_threads()
: CParallel
- set_num_vectors()
: CSimpleFeatures< ST >
- set_objective()
: CSVM
- set_observation_nocache()
: CHMM
- set_observations()
: CHMM
- set_opt_a()
: CFKFeatures
- set_optimization_type()
: CCombinedKernel
, CKernel
- set_output()
: CPerformanceMeasures
- set_p()
: CHMM
, CDynProg
- set_p_vector()
: CDynProg
- set_plif()
: CPlif
- set_plif_length()
: CPlif
- set_plif_limits()
: CPlif
- set_plif_penalty()
: CPlif
- set_position_weights()
: CWeightedDegreeStringKernel
, CTrie< Trie >
, CWeightedDegreePositionStringKernel
- set_position_weights_lhs()
: CWeightedDegreePositionStringKernel
- set_position_weights_rhs()
: CWeightedDegreePositionStringKernel
- set_precompute_matrix()
: CDistance
, CCombinedKernel
, CKernel
- set_precomputed_subkernels_enabled()
: CSVM
- set_preprocessed()
: CFeatures
- set_prior_probs()
: CSalzbergWordKernel
- set_property()
: CKernel
- set_pseudo()
: CHMM
- set_pseudo_count()
: CDistribution
- set_psi()
: CHMM
- set_q()
: CHMM
, CDynProg
- set_q_vector()
: CDynProg
- set_qpsize()
: CSubGradientSVM
, CSVM
- set_qpsize_max()
: CSubGradientSVM
- set_regularized_bias_enabled()
: CSVMSGD
- set_shifts()
: CWeightedDegreePositionStringKernel
- set_shrinking_enabled()
: CSVM
- set_solver()
: CQPBSVMLib
- set_sparse_feature_matrix()
: CSparseFeatures< ST >
- set_subkernel_weights()
: CCombinedKernel
, CKernel
, CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
- set_support_vector()
: CSVM
- set_support_vectors()
: CSVM
- set_svm()
: CMultiClassSVM
- set_target()
: CIO
- set_target_to_stderr()
: CIO
- set_target_to_stdout()
: CIO
- set_transform_type()
: CPlif
- set_transition_probs()
: CLinearHMM
- set_triangle_kernel_matrix_from_full()
: CCustomKernel
- set_triangle_kernel_matrix_from_triangle()
: CCustomKernel
- set_true_labels()
: CPerformanceMeasures
- set_tube_epsilon()
: CSVM
- set_use_block_computation()
: CWeightedDegreeStringKernel
- set_use_cache()
: CPlif
- set_use_compact_terminal_nodes()
: CTrie< Trie >
- set_use_dict_diagonal_optimization()
: CCommWordStringKernel
- set_use_normalization()
: CWeightedDegreeStringKernel
- set_use_svm()
: CPlif
- set_w()
: CLinearClassifier
, CLinearKernel
, CSparseLinearClassifier
- set_wd_weights()
: CWeightedDegreeStringKernel
, CWDSVMOcas
, CWeightedDegreePositionStringKernel
, CWeightedCommWordStringKernel
- set_wd_weights_by_type()
: CWeightedDegreeStringKernel
- set_weight_epsilon()
: CSVM
- set_weights()
: CWeightedCommWordStringKernel
, CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
- set_weights_in_tree()
: CTrie< Trie >
- set_which_degree()
: CWeightedDegreeStringKernel
- SetData()
: sKernel
- setstandardweights()
: CPyramidChi2
- SetSubproblem()
: sKernel
- shift
: S_THREAD_PARAM< Trie >
, CWeightedDegreePositionStringKernel
- shift_len
: CWeightedDegreePositionStringKernel
- shift_offset()
: CStringFeatures< ST >
- shift_step
: CGaussianShiftKernel
- shift_symbol()
: CStringFeatures< ST >
- ShogunException()
: ShogunException
- show_progress
: CIO
- shrinking
: svm_parameter
- si
: radix_stack_t< T >
- sigma
: sKernel
- sign()
: CMath
- sign_words
: CDynProg
- sign_words_array
: CDynProg
- signals
: CSignal
- single_string
: CStringFeatures< ST >
- size
: thread_qsort
- sKernel()
: sKernel
- skip_blanks()
: CIO
- skip_spaces()
: CIO
- sn
: radix_stack_t< T >
- Solve()
: Solver
, Solver_NU
- solve_qp()
: CQPBSVMLib
- Solver()
: Solver
- Solver_NU()
: Solver_NU
- solver_time
: ocas_return_value_T
- sort()
: CMath
, CSVMOcas
, CWDSVMOcas
- sort_learn_a()
: CModel
- sort_learn_b()
: CModel
- sort_limit
: thread_qsort
- sort_time
: ocas_return_value_T
- sparse_dot()
: CSparseFeatures< ST >
- sparse_feature_matrix
: CSparseFeatures< ST >
- sq()
: CMath
- sq_lhs
: CSparseGaussianKernel
, CSparseEuclidianDistance
- sq_rhs
: CSparseEuclidianDistance
, CSparseGaussianKernel
- sqdist()
: CKMeans
- sqrt()
: CMath
- sqrtdiag_lhs
: CFixedDegreeStringKernel
, CPolyMatchStringKernel
, CCommWordStringKernel
, CCommUlongStringKernel
, CSparsePolyKernel
, CPolyKernel
, CHistogramWordKernel
, CPolyMatchWordKernel
, CSalzbergWordKernel
- sqrtdiag_rhs
: CFixedDegreeStringKernel
, CPolyKernel
, CSalzbergWordKernel
, CPolyMatchStringKernel
, CHistogramWordKernel
, CPolyMatchWordKernel
, CCommWordStringKernel
, CCommUlongStringKernel
, CSparsePolyKernel
- start()
: CTime
, wdocas_thread_params_output
, S_THREAD_PARAM< Trie >
, wdocas_thread_params_add
- start_pos
: CDynProg::svm_values_struct
- start_runtime
: CTime
- start_time
: CTime
- state_probability()
: CHMM
- states_per_observation_psi
: CHMM
- status
: CFile
, CHMM
, CSimpleFile< T >
, CRealFileFeatures
- std
: CPruneVarSubMean
- stop()
: CTime
- stop_time
: CTime
- string
: T_STRING< T >
, ConsensusEntry
- string_length
: CWDSVMOcas
- string_words
: CDynProg
- string_words_array
: CDynProg
- subkernel
: CAUCKernel
- subkernel_weights_buffer
: CCombinedKernel
- Subproblem()
: QPproblem
- substrs
: TreeParseInfo
- sum()
: CMath
, T_ALPHA_BETA
- sum_abs()
: CMath
- sum_CXy_active
: CSubGradientSVM
- sum_Cy_active
: CSubGradientSVM
- sum_m2_s2
: CSalzbergWordKernel
, CHistogramWordKernel
- SV
: svm_model
- sv_coef
: svm_model
- sv_count
: CCombinedKernel
- sv_idx
: CCombinedKernel
- sv_weight
: CCombinedKernel
- SVC_Q()
: SVC_Q
- svm
: S_THREAD_PARAM< Trie >
- svm_arrays_clean
: CDynProg
- svm_loaded
: CSVM
- svm_model
: CSVM
- svm_pos_start
: CDynProg
- svm_type
: svm_parameter
- svm_value_unnormalized_single
: CDynProg
- svm_values
: CDynProg::svm_values_struct
- svm_values_unnormalized
: CDynProg::svm_values_struct
- SVR_Q()
: SVR_Q
- svs
: CSVM::TModel
- swap()
: CMath
- swap_index()
: Solver
, SVR_Q
, ONE_CLASS_Q
, Kernel
, SVC_Q
, QMatrix
, Cache
- symbol_mask_table
: CWordFeatures
, CStringFeatures< ST >