CStringFeatures< ST > Member List

This is the complete list of members for CStringFeatures< ST >, including all inherited members.

add_preproc(CPreProc *p)CFeatures [virtual]
alphabetCStringFeatures< ST > [protected]
apply_preproc(bool force_preprocessing=false)CStringFeatures< ST > [virtual]
CFeatures(INT size)CFeatures
CFeatures(const CFeatures &orig)CFeatures
CFeatures(CHAR *fname)CFeatures
check_feature_compatibility(CFeatures *f)CFeatures
clean_preprocs()CFeatures
cleanup()CStringFeatures< ST >
CSGObject()CSGObject
CSGObject(const CSGObject &orig)CSGObject
CStringFeatures(E_ALPHABET alpha)CStringFeatures< ST >
CStringFeatures(CAlphabet *alpha)CStringFeatures< ST >
CStringFeatures(const CStringFeatures &orig)CStringFeatures< ST >
CStringFeatures(char *fname, E_ALPHABET alpha=DNA)CStringFeatures< ST >
del_preproc(INT num)CFeatures [virtual]
duplicate() const CStringFeatures< ST > [virtual]
featuresCStringFeatures< ST > [protected]
get_alphabet()CStringFeatures< ST >
get_cache_size()CFeatures
get_feature(INT vec_num, INT feat_num)CStringFeatures< ST > [virtual]
get_feature_class()CStringFeatures< ST > [virtual]
get_feature_type()CStringFeatures< ST > [virtual]
get_feature_type()CStringFeatures< ST > [virtual]
get_feature_type()CStringFeatures< ST > [virtual]
get_feature_type()CStringFeatures< ST > [virtual]
get_feature_type()CStringFeatures< ST > [virtual]
get_feature_type()CStringFeatures< ST > [virtual]
get_feature_type()CStringFeatures< ST > [virtual]
get_feature_type()CStringFeatures< ST > [virtual]
get_feature_type()CStringFeatures< ST > [virtual]
get_feature_type()CStringFeatures< ST > [virtual]
get_feature_vector(INT num, INT &len)CStringFeatures< ST > [virtual]
get_features(INT &num_str, INT &max_str_len)CStringFeatures< ST > [virtual]
get_masked_symbols(ST symbol, BYTE mask)CStringFeatures< ST >
get_max_num_symbols()CStringFeatures< ST >
get_max_vector_length()CStringFeatures< ST > [virtual]
get_num_preproc()CFeatures
get_num_preprocessed()CFeatures
get_num_symbols()CStringFeatures< ST >
get_num_vectors()CStringFeatures< ST > [virtual]
get_order()CStringFeatures< ST >
get_original_num_symbols()CStringFeatures< ST >
get_preproc(INT num)CFeatures
get_size()CStringFeatures< ST > [virtual]
get_string(ST **dst, INT *len)CStringFeatures< ST >
get_vector_length(INT vec_num)CStringFeatures< ST > [virtual]
have_same_length(INT len)CStringFeatures< ST >
ioCSGObject [static]
is_preprocessed(INT num)CFeatures
length_of_single_stringCStringFeatures< ST > [protected]
list_feature_obj()CFeatures
load(CHAR *fname)CStringFeatures< ST > [virtual]
load_dna_file(CHAR *fname, bool remap_to_bin=true)CStringFeatures< ST >
load_from_directory(CHAR *dirname)CStringFeatures< ST >
max_string_lengthCStringFeatures< ST > [protected]
num_symbolsCStringFeatures< ST > [protected]
num_vectorsCStringFeatures< ST > [protected]
obtain_by_position_list(INT window_size, CDynamicArray< INT > *positions, INT skip=0)CStringFeatures< ST >
obtain_by_sliding_window(INT window_size, INT step_size, INT skip=0)CStringFeatures< ST >
obtain_from_char(CStringFeatures< CHAR > *sf, INT start, INT p_order, INT gap, bool rev)CStringFeatures< ST >
obtain_from_char_features(CStringFeatures< CT > *sf, INT start, INT p_order, INT gap, bool rev)CStringFeatures< ST >
orderCStringFeatures< ST > [protected]
original_num_symbolsCStringFeatures< ST > [protected]
parallelCSGObject [static]
reshape(INT num_features, INT num_vectors)CFeatures [virtual]
save(CHAR *dest)CStringFeatures< ST > [virtual]
select_feature_vector(INT num)CStringFeatures< ST >
selected_vectorCStringFeatures< ST > [protected]
set_feature_vector(INT num, ST *string, INT len)CStringFeatures< ST > [virtual]
set_features(T_STRING< ST > *p_features, INT p_num_vectors, INT p_max_string_length)CStringFeatures< ST >
set_preprocessed(INT num)CFeatures
shift_offset(ST offset, INT amount)CStringFeatures< ST >
shift_symbol(ST symbol, INT amount)CStringFeatures< ST >
single_stringCStringFeatures< ST > [protected]
symbol_mask_tableCStringFeatures< ST > [protected]
translate_from_single_order(ST *obs, INT sequence_length, INT start, INT p_order, INT max_val)CStringFeatures< ST > [protected]
translate_from_single_order(ST *obs, INT sequence_length, INT start, INT p_order, INT max_val, INT gap)CStringFeatures< ST > [protected]
translate_from_single_order_reversed(ST *obs, INT sequence_length, INT start, INT p_order, INT max_val)CStringFeatures< ST > [protected]
translate_from_single_order_reversed(ST *obs, INT sequence_length, INT start, INT p_order, INT max_val, INT gap)CStringFeatures< ST > [protected]
versionCSGObject [static]
~CFeatures()CFeatures [virtual]
~CSGObject()CSGObject [virtual]
~CStringFeatures()CStringFeatures< ST > [virtual]


SHOGUN Machine Learning Toolbox - Documentation