public class GenotypeReader extends Object
Modifier and Type | Class and Description |
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static class |
GenotypeReader.VariantIterator
Deprecated.
Small class to encapsulate an iterator over variants, optionally with a sequence dictionary.
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Constructor and Description |
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GenotypeReader()
Deprecated.
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Modifier and Type | Method and Description |
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GenotypeReader.VariantIterator |
read(File file)
Deprecated.
Please use VCFFileReader in Picard-public instead of this class.
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GenotypeReader.VariantIterator |
read(File file,
IntervalList intervals)
Deprecated.
Please use VCFFileReader in Picard-public instead of this class.
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public GenotypeReader.VariantIterator read(File file)
public GenotypeReader.VariantIterator read(File file, IntervalList intervals)