Package | Description |
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picard.util | |
picard.vcf |
Modifier and Type | Method and Description |
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static DbSnpBitSetUtil.DbSnpBitSets |
DbSnpBitSetUtil.createSnpAndIndelBitSets(File dbSnpFile,
SAMSequenceDictionary sequenceDictionary)
Factory method to create both a SNP bitmask and an indel bitmask in a single pass of the VCF.
|
static DbSnpBitSetUtil.DbSnpBitSets |
DbSnpBitSetUtil.createSnpAndIndelBitSets(File dbSnpFile,
SAMSequenceDictionary sequenceDictionary,
IntervalList intervals)
Factory method to create both a SNP bitmask and an indel bitmask in a single pass of the VCF.
|
Constructor and Description |
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CallingMetricAccumulator(DbSnpBitSetUtil.DbSnpBitSets dbsnp) |
GvcfMetricAccumulator(DbSnpBitSetUtil.DbSnpBitSets dbsnp) |