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Namespaces | |
namespace | Statistics |
Data Structures | |
class | AdaptiveStochasticGradientDescentOptimizer |
This class implements a gradient descent optimizer with adaptive gain. More... | |
class | AdvancedBSplineDeformableTransform |
Deformable transform using a B-spline representation. More... | |
class | AdvancedBSplineDeformableTransformBase |
Base class for deformable transform using a B-spline representation. More... | |
class | AdvancedCombinationTransform |
This class combines two transforms: an 'initial transform' with a 'current transform'. More... | |
class | AdvancedEuler3DTransform |
AdvancedEuler3DTransform of a vector space (e.g. space coordinates) More... | |
class | AdvancedIdentityTransform |
Implementation of an Identity Transform. More... | |
class | AdvancedImageToImageMetric |
An extension of the ITK ImageToImageMetric. It is the intended base class for all elastix metrics. More... | |
class | AdvancedKappaStatisticImageToImageMetric |
Computes similarity between two objects to be registered. More... | |
class | AdvancedMatrixOffsetTransformBase |
class | AdvancedMeanSquaresImageToImageMetric |
Compute Mean square difference between two images, based on AdvancedImageToImageMetric... More... | |
class | AdvancedNormalizedCorrelationImageToImageMetric |
Computes normalized correlation between two images, based on AdvancedImageToImageMetric... More... | |
class | AdvancedRayCastInterpolateImageFunction |
Projective interpolation of an image at specified positions. More... | |
class | AdvancedRigid2DTransform |
AdvancedRigid2DTransform of a vector space (e.g. space coordinates) More... | |
class | AdvancedRigid3DTransform |
AdvancedRigid3DTransform of a vector space (e.g. space coordinates) More... | |
class | AdvancedSimilarity2DTransform |
AdvancedSimilarity2DTransform of a vector space (e.g. space coordinates) More... | |
class | AdvancedSimilarity3DTransform |
AdvancedSimilarity3DTransform of a vector space (e.g. space coordinates) More... | |
class | AdvancedTransform |
Transform maps points, vectors and covariant vectors from an input space to an output space. More... | |
class | AdvancedTranslationTransform |
Translation transformation of a vector space (e.g. space coordinates) More... | |
class | AdvancedVersorRigid3DTransform |
AdvancedVersorRigid3DTransform of a vector space (e.g. space coordinates) More... | |
class | AdvancedVersorTransform |
class | AffineDTI3DTransform |
AffineDTI3DTransform of a vector space (e.g. space coordinates) More... | |
class | ANNbdTree |
class | ANNBinaryTreeCreator |
class | ANNBruteForceTree |
class | ANNFixedRadiusTreeSearch |
class | ANNkDTree |
class | ANNPriorityTreeSearch |
class | ANNStandardTreeSearch |
class | BinaryANNTreeBase |
class | BinaryANNTreeSearchBase |
class | BinaryTreeBase |
class | BinaryTreeSearchBase |
class | BSplineDerivativeKernelFunction2 |
Derivative of a B-spline kernel used for density estimation and nonparametric regression. More... | |
class | BSplineInterpolationDerivativeWeightFunction |
Returns the weights over the support region used for B-spline interpolation/reconstruction. More... | |
class | BSplineInterpolationSecondOrderDerivativeWeightFunction |
Returns the weights over the support region used for B-spline interpolation/reconstruction. More... | |
class | BSplineInterpolationWeightFunction2 |
Returns the weights over the support region used for B-spline interpolation/reconstruction. More... | |
class | BSplineInterpolationWeightFunctionBase |
Returns the weights over the support region used for B-spline interpolation/reconstruction. More... | |
class | BSplineKernelFunction2 |
B-spline kernel used for density estimation and nonparameteric regression. More... | |
class | BSplineSecondOrderDerivativeKernelFunction2 |
Derivative of a B-spline kernel used for density estimation and nonparametric regression. More... | |
class | CenteredTransformInitializer2 |
CenteredTransformInitializer2 is a helper class intended to initialize the center of rotation and the translation of Transforms having the center of rotation among their parameters. More... | |
class | CMAEvolutionStrategyOptimizer |
A Covariance Matrix Adaptation Evolution Strategy Optimizer. More... | |
class | CombinationImageToImageMetric |
Combines multiple metrics. More... | |
class | CorrespondingPointsEuclideanDistancePointMetric |
Computes the Euclidean distance between a moving point-set and a fixed point-set. Correspondence is needed. More... | |
class | CyclicBSplineDeformableTransform |
Deformable transform using a B-spline representation in which the B-spline grid is formulated in a cyclic way. More... | |
class | CyclicGridScheduleComputer |
This class computes all information about the B-spline grid. More... | |
class | DeformationFieldInterpolatingTransform |
Transform that interpolates a given deformation field. More... | |
class | DeformationFieldRegulizer |
This class combines any itk transform with the DeformationFieldTransform. More... | |
class | DeformationVectorFieldTransform |
An itk transform based on a DeformationVectorField. More... | |
class | DisplacementMagnitudePenaltyTerm |
A cost function that calculates ![]() | |
class | ElasticBodyReciprocalSplineKernelTransform2 |
class | ElasticBodySplineKernelTransform2 |
class | ErodeMaskImageFilter |
class | ExponentialLimiterFunction |
A soft limiter. More... | |
class | FiniteDifferenceGradientDescentOptimizer |
An optimizer based on gradient descent ... More... | |
class | FullSearchOptimizer |
An optimizer based on full search. More... | |
class | GenericConjugateGradientOptimizer |
A set of conjugate gradient algorithms. More... | |
class | GetConstNumberOfWeightsHack |
class | GetConstNumberOfWeightsHack< SplineOrder, 0 > |
class | GradientDescentOptimizer2 |
Implement a gradient descent optimizer. More... | |
class | GradientDifferenceImageToImageMetric |
Computes similarity between two objects to be registered. More... | |
class | GridScheduleComputer |
This class computes all information about the B-spline grid, given the image information and the desired grid spacing. More... | |
class | HardLimiterFunction |
A hard limiter. More... | |
class | ImageFileCastWriter |
Casts pixel type and writes image data. More... | |
class | ImageFullSampler |
Samples all voxels in the InputImageRegion. More... | |
class | ImageGridSampler |
Samples image voxels on a regular grid. More... | |
class | ImageMaskSpatialObject2 |
Implementation of an image mask as spatial object. More... | |
class | ImageRandomCoordinateSampler |
Samples an image by randomly composing a set of physical coordinates. More... | |
class | ImageRandomSampler |
Samples randomly some voxels of an image. More... | |
class | ImageRandomSamplerBase |
This class is a base class for any image sampler that randomly picks samples. More... | |
class | ImageRandomSamplerSparseMask |
Samples randomly some voxels of an image. More... | |
class | ImageSample |
A class that defines an image sample, which is the coordinates of a point and its value. More... | |
class | ImageSamplerBase |
This class is a base class for any image sampler. More... | |
class | ImageSpatialObject2 |
Implementation of an image as spatial object. More... | |
class | ImageToImageMetricWithFeatures |
Computes similarity between regions of two images. More... | |
class | ImageToVectorContainerFilter |
Base class that takes in an image and pops out a vector container. More... | |
class | itkCUDAResampleImageFilter |
Resample an image on the GPU via a coordinate transform. More... | |
class | KernelTransform2 |
class | KNNGraphAlphaMutualInformationImageToImageMetric |
Computes similarity between two images to be registered. More... | |
class | LimiterFunctionBase |
Base class for all ITK limiter function objects. More... | |
class | LineSearchOptimizer |
A base class for LineSearch optimizers. More... | |
class | MeshFileReaderBase |
Base class for mesh readers. More... | |
class | MeshFileReaderException |
Base exception class for IO conflicts. More... | |
class | MevisDicomTiffImageIO |
class | MevisDicomTiffImageIOFactory |
Create instances of MevisDicomTiffImageIO objects using an object factory. More... | |
class | MoreThuenteLineSearchOptimizer |
ITK version of the MoreThuente line search algorithm. More... | |
class | MultiInputImageRandomCoordinateSampler |
Samples an image by randomly composing a set of physical coordinates. More... | |
class | MultiInputImageToImageMetricBase |
Implements a metric base class that takes multiple inputs. More... | |
class | MultiInputMultiResolutionImageRegistrationMethodBase |
Base class for multi-resolution image registration methods. More... | |
class | MultiMetricMultiResolutionImageRegistrationMethod |
Base class for multi-resolution image registration methods. More... | |
class | MultiOrderBSplineDecompositionImageFilter |
Calculates the B-Spline coefficients of an image. Spline order may be per dimension from 0 to 5 per. More... | |
class | MultiResolutionGaussianSmoothingPyramidImageFilter |
Framework for creating images in a multi-resolution pyramid. More... | |
class | MultiResolutionImageRegistrationMethod2 |
Base class for multi-resolution image registration methods. More... | |
class | MultiResolutionImageRegistrationMethodWithFeatures |
Class for multi-resolution image registration methods. More... | |
class | MultiResolutionShrinkPyramidImageFilter |
Framework for creating images in a multi-resolution pyramid. More... | |
class | NDImageBase |
An image whose dimension can be specified at runtime. More... | |
class | NDImageTemplate |
This class is a specialization of the NDImageBase, which acts as a wrap around an itk::Image. More... | |
class | NormalizedGradientCorrelationImageToImageMetric |
An metric based on the itk::NormalizedGradientCorrelationImageToImageMetric. More... | |
class | ParabolicErodeDilateImageFilter |
Parent class for morphological operations with parabolic structuring elements. More... | |
class | ParabolicErodeImageFilter |
Class for morphological erosion operations with parabolic structuring elements. More... | |
class | ParameterFileParser |
Implements functionality to read a parameter file. More... | |
class | ParameterMapInterface |
Implements functionality to get parameters from a parameter map. More... | |
class | ParzenWindowHistogramImageToImageMetric |
A base class for image metrics based on a joint histogram computed using Parzen Windowing. More... | |
class | ParzenWindowMutualInformationImageToImageMetric |
Computes the mutual information between two images to be registered using the method of Mattes et al. More... | |
class | ParzenWindowNormalizedMutualInformationImageToImageMetric |
Computes the normalized mutual information between two images to be registered using a method based on Thevenaz&Unser [3]. More... | |
class | PatternIntensityImageToImageMetric |
Computes similarity between two objects to be registered. More... | |
class | QuasiNewtonLBFGSOptimizer |
ITK version of the lbfgs algorithm ... More... | |
class | ReducedDimensionBSplineInterpolateImageFunction |
Evaluates the B-Spline interpolation of an image. Spline order may be from 0 to 5. More... | |
class | RSGDEachParameterApartBaseOptimizer |
An optimizer based on gradient descent... More... | |
class | RSGDEachParameterApartOptimizer |
An optimizer based on gradient descent. More... | |
class | ScaledSingleValuedCostFunction |
A cost function that applies a scaling to another cost function. More... | |
class | ScaledSingleValuedNonLinearOptimizer |
class | SingleValuedPointSetToPointSetMetric |
Computes similarity between two point sets. More... | |
class | StackTransform |
Implements stack of transforms: one for every last dimension index. More... | |
class | StandardGradientDescentOptimizer |
This class implements a gradient descent optimizer with a decaying gain. More... | |
class | ThinPlateR2LogRSplineKernelTransform2 |
class | ThinPlateSplineKernelTransform2 |
class | TransformBendingEnergyPenaltyTerm |
A cost function that calculates the bending energy of a transformation. More... | |
class | TransformixInputPointFileReader |
A reader that understands transformix input point files. More... | |
class | TransformPenaltyTerm |
A cost function that calculates a penalty term on a transformation. More... | |
class | TransformRigidityPenaltyTerm |
A cost function that calculates a rigidity penalty term. More... | |
class | TransformToDeterminantOfSpatialJacobianSource |
Generate the spatial Jacobian from a coordinate transform. More... | |
class | TransformToSpatialJacobianSource |
Generate the spatial Jacobian matrix from a coordinate transform. More... | |
class | TranslationTransformInitializer |
TranslationTransformInitializer is a helper class intended to initialize the translation of a TranslationTransforms. More... | |
class | UpsampleBSplineParametersFilter |
Convenience class for upsampling a B-spline coefficient image. More... | |
class | VarianceOverLastDimensionImageMetric |
Compute the sum of variances over the slowest varying dimension in the moving image. More... | |
class | VectorContainerSource |
A base class for creating an ImageToVectorContainerFilter. More... | |
class | VectorDataContainer |
Define a front-end to the STL "vector" container that conforms to the IndexedContainerInterface. More... | |
class | VectorMeanDiffusionImageFilter |
Applies an averaging filter to an image. More... | |
class | VolumeSplineKernelTransform2 |
class | WeightedCombinationTransform |
Implements a weighted linear combination of multiple transforms. More... | |
Functions | |
template<class LineBufferType , class RealType , bool doDilate> | |
void | DoLine (LineBufferType &LineBuf, LineBufferType &tmpLineBuf, const RealType magnitude, const RealType m_Extreme) |
template<class TInIter , class TOutIter , class RealType , class OutputPixelType , bool doDilate> | |
void | doOneDimension (TInIter &inputIterator, TOutIter &outputIterator, ProgressReporter &progress, const long LineLength, const unsigned direction, const int m_MagnitudeSign, const bool m_UseImageSpacing, const RealType m_Extreme, const RealType image_scale, const RealType Sigma) |
This class is a modification of an ITK class. The original copyright message is pasted here, which includes also the version information:
This file is a slightly modified version of an ITK file. Original ITK copyright message:
Parts of the code were taken from an ITK file. Original ITK copyright message, just for reference:
This class is a slight modification of the original ITK class: MultiResolutionImageRegistrationMethod. The original copyright message is pasted here, which includes also the version information:
Includes for the Superclass. Includes for the kNN trees. Supported trees. Supported tree searchers. Include for the spatial derivatives.
Needed for the check of a B-spline transform. Needed for the filtering of the B-spline coefficients. Include stuff needed for the construction of the rigidity coefficient image.
void itk::DoLine | ( | LineBufferType & | LineBuf, |
LineBufferType & | tmpLineBuf, | ||
const RealType | magnitude, | ||
const RealType | m_Extreme | ||
) |
Definition at line 9 of file itkParabolicMorphUtils.h.
void itk::doOneDimension | ( | TInIter & | inputIterator, |
TOutIter & | outputIterator, | ||
ProgressReporter & | progress, | ||
const long | LineLength, | ||
const unsigned | direction, | ||
const int | m_MagnitudeSign, | ||
const bool | m_UseImageSpacing, | ||
const RealType | m_Extreme, | ||
const RealType | image_scale, | ||
const RealType | Sigma | ||
) |
Definition at line 56 of file itkParabolicMorphUtils.h.
Generated on 11-05-2012 for elastix by ![]() |
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