![]() |
Home | Main Page | Modules | Namespace List | Class Hierarchy | Alphabetical List | Data Structures | File List | Namespace Members | Data Fields | Globals | Related Pages |
#include <elxFullSearchOptimizer.h>
An optimizer based on the itk::FullSearchOptimizer.
Optimizer that scans a subspace of the parameter space and searches for the best parameters.
The results are written to the output-directory as an image OptimizationSurface.<elastixlevel>.R<resolution>.mhd", which is an N-dimensional float image, where N is the dimension of the search space.
The parameters used in this class are: Optimizer: Select this optimizer as follows:
(Optimizer "FullSearch")
FullSearchSpace<r>: Defines for resolution r a range of parameters to scan.
Full syntax: (FullSearchSpace<r> <parameter_name> <parameter_nr> <min> <max> <stepsize> [...] )
example: (FullSearchSpace0 "translation_x" 2 -4.0 3.0 1.0 "rotation_y" 3 -1.0 1.0 0.5)
This varies the second transform parameter in the range [-4.0 3.0] with steps of 1.0 and the third parameter in the range [-1.0 1.0] with steps of 0.5. The names are used as column headers in the screen output.
Definition at line 57 of file elxFullSearchOptimizer.h.
typedef Superclass2::ConfigurationPointer elastix::FullSearch< TElastix >::ConfigurationPointer |
Reimplemented from elastix::OptimizerBase< TElastix >.
Definition at line 103 of file elxFullSearchOptimizer.h.
typedef Superclass2::ConfigurationType elastix::FullSearch< TElastix >::ConfigurationType |
Reimplemented from elastix::OptimizerBase< TElastix >.
Definition at line 102 of file elxFullSearchOptimizer.h.
typedef SmartPointer<const Self> elastix::FullSearch< TElastix >::ConstPointer |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 70 of file elxFullSearchOptimizer.h.
typedef Superclass1::CostFunctionPointer elastix::FullSearch< TElastix >::CostFunctionPointer |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 86 of file elxFullSearchOptimizer.h.
typedef Superclass1::CostFunctionType elastix::FullSearch< TElastix >::CostFunctionType |
Typedef's inherited from Superclass1.
Reimplemented from itk::FullSearchOptimizer.
Definition at line 85 of file elxFullSearchOptimizer.h.
typedef std::map<unsigned int, std::string> elastix::FullSearch< TElastix >::DimensionNameMapType |
To store the names of the search space dimensions
Definition at line 113 of file elxFullSearchOptimizer.h.
typedef Superclass2::ElastixPointer elastix::FullSearch< TElastix >::ElastixPointer |
Reimplemented from elastix::OptimizerBase< TElastix >.
Definition at line 101 of file elxFullSearchOptimizer.h.
typedef Superclass2::ElastixType elastix::FullSearch< TElastix >::ElastixType |
Typedef's inherited from Elastix.
Reimplemented from elastix::OptimizerBase< TElastix >.
Definition at line 100 of file elxFullSearchOptimizer.h.
typedef Superclass2::ITKBaseType elastix::FullSearch< TElastix >::ITKBaseType |
Reimplemented from elastix::OptimizerBase< TElastix >.
Definition at line 106 of file elxFullSearchOptimizer.h.
typedef Superclass1::MeasureType elastix::FullSearch< TElastix >::MeasureType |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 88 of file elxFullSearchOptimizer.h.
typedef DimensionNameMapType::const_iterator elastix::FullSearch< TElastix >::NameIteratorType |
Definition at line 114 of file elxFullSearchOptimizer.h.
typedef NDImageType::Pointer elastix::FullSearch< TElastix >::NDImagePointer |
Definition at line 110 of file elxFullSearchOptimizer.h.
typedef NDImageBase<float> elastix::FullSearch< TElastix >::NDImageType |
To store the results of the full search
Definition at line 109 of file elxFullSearchOptimizer.h.
typedef Superclass1::ParametersType elastix::FullSearch< TElastix >::ParametersType |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 87 of file elxFullSearchOptimizer.h.
typedef Superclass1::ParameterValueType elastix::FullSearch< TElastix >::ParameterValueType |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 89 of file elxFullSearchOptimizer.h.
typedef SmartPointer<Self> elastix::FullSearch< TElastix >::Pointer |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 69 of file elxFullSearchOptimizer.h.
typedef Superclass1::RangeType elastix::FullSearch< TElastix >::RangeType |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 91 of file elxFullSearchOptimizer.h.
typedef Superclass1::RangeValueType elastix::FullSearch< TElastix >::RangeValueType |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 90 of file elxFullSearchOptimizer.h.
typedef Superclass2::RegistrationPointer elastix::FullSearch< TElastix >::RegistrationPointer |
Reimplemented from elastix::OptimizerBase< TElastix >.
Definition at line 105 of file elxFullSearchOptimizer.h.
typedef Superclass2::RegistrationType elastix::FullSearch< TElastix >::RegistrationType |
Reimplemented from elastix::OptimizerBase< TElastix >.
Definition at line 104 of file elxFullSearchOptimizer.h.
typedef Superclass1::SearchSpaceIndexType elastix::FullSearch< TElastix >::SearchSpaceIndexType |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 96 of file elxFullSearchOptimizer.h.
typedef Superclass1::SearchSpaceIteratorType elastix::FullSearch< TElastix >::SearchSpaceIteratorType |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 94 of file elxFullSearchOptimizer.h.
typedef Superclass1::SearchSpacePointer elastix::FullSearch< TElastix >::SearchSpacePointer |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 93 of file elxFullSearchOptimizer.h.
typedef Superclass1::SearchSpacePointType elastix::FullSearch< TElastix >::SearchSpacePointType |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 95 of file elxFullSearchOptimizer.h.
typedef Superclass1::SearchSpaceSizeType elastix::FullSearch< TElastix >::SearchSpaceSizeType |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 97 of file elxFullSearchOptimizer.h.
typedef Superclass1::SearchSpaceType elastix::FullSearch< TElastix >::SearchSpaceType |
Reimplemented from itk::FullSearchOptimizer.
Definition at line 92 of file elxFullSearchOptimizer.h.
typedef FullSearch elastix::FullSearch< TElastix >::Self |
Standard ITK.
Reimplemented from itk::FullSearchOptimizer.
Definition at line 66 of file elxFullSearchOptimizer.h.
typedef FullSearchOptimizer elastix::FullSearch< TElastix >::Superclass1 |
Definition at line 67 of file elxFullSearchOptimizer.h.
typedef OptimizerBase<TElastix> elastix::FullSearch< TElastix >::Superclass2 |
Definition at line 68 of file elxFullSearchOptimizer.h.
elastix::FullSearch< TElastix >::FullSearch | ( | ) | [protected] |
virtual elastix::FullSearch< TElastix >::~FullSearch | ( | ) | [inline, protected, virtual] |
Definition at line 130 of file elxFullSearchOptimizer.h.
elastix::FullSearch< TElastix >::FullSearch | ( | const Self & | ) | [private] |
virtual void elastix::FullSearch< TElastix >::AfterEachIteration | ( | void | ) | [virtual] |
Reimplemented from elastix::BaseComponent.
virtual void elastix::FullSearch< TElastix >::AfterEachResolution | ( | void | ) | [virtual] |
Reimplemented from elastix::BaseComponent.
virtual void elastix::FullSearch< TElastix >::AfterRegistration | ( | void | ) | [virtual] |
Reimplemented from elastix::BaseComponent.
virtual void elastix::FullSearch< TElastix >::BeforeEachResolution | ( | void | ) | [virtual] |
Reimplemented from elastix::BaseComponent.
virtual void elastix::FullSearch< TElastix >::BeforeRegistration | ( | void | ) | [virtual] |
Methods that have to be present everywhere.
Reimplemented from elastix::BaseComponent.
virtual bool elastix::FullSearch< TElastix >::CheckSearchSpaceRangeDefinition | ( | const std::string & | fullFieldName, |
const bool | found, | ||
const unsigned int | entry_nr | ||
) | const [protected, virtual] |
Checks if an error generated while reading the search space ranges from the parameter file is a real error. Prints some error message if so.
elastix::FullSearch< TElastix >::elxClassNameMacro | ( | "FullSearch< TElastix >" | ) |
Name of this class. Use this name in the parameter file to select this specific optimizer.
example: (Optimizer "FullSearch")
virtual const char* elastix::FullSearch< TElastix >::GetClassName | ( | ) | const [virtual] |
Run-time type information (and related methods).
Reimplemented from itk::FullSearchOptimizer.
virtual NDImageType* elastix::FullSearch< TElastix >::GetOptimizationSurface | ( | ) | [virtual] |
Get a pointer to the image containing the optimization surface.
static Pointer elastix::FullSearch< TElastix >::New | ( | ) | [static] |
Method for creation through the object factory.
Reimplemented from itk::FullSearchOptimizer.
void elastix::FullSearch< TElastix >::operator= | ( | const Self & | ) | [private] |
NDImagePointer elastix::FullSearch< TElastix >::m_OptimizationSurface [protected] |
Definition at line 130 of file elxFullSearchOptimizer.h.
DimensionNameMapType elastix::FullSearch< TElastix >::m_SearchSpaceDimensionNames [protected] |
Definition at line 134 of file elxFullSearchOptimizer.h.
Generated on 11-05-2012 for elastix by ![]() |
![]() |